Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP3S1Q92572 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 FLJ13224-201ENST00000313737 1514 ntBASIC16.41■□□□□ 0.22
AP3S1Q92572 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
AP3S1Q92572 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.41■□□□□ 0.22
AP3S1Q92572 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.41■□□□□ 0.22
AP3S1Q92572 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.41■□□□□ 0.22
AP3S1Q92572 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
AP3S1Q92572 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AP3S1Q92572 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.41■□□□□ 0.22
AP3S1Q92572 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP3S1Q92572 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP3S1Q92572 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.4■□□□□ 0.22
AP3S1Q92572 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.4■□□□□ 0.22
AP3S1Q92572 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
AP3S1Q92572 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP3S1Q92572 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.4■□□□□ 0.22
AP3S1Q92572 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
AP3S1Q92572 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3S1Q92572 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3S1Q92572 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
AP3S1Q92572 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3S1Q92572 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3S1Q92572 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
AP3S1Q92572 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3S1Q92572 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.39■□□□□ 0.21
AP3S1Q92572 YBX1P10-201ENST00000444752 975 ntBASIC16.39■□□□□ 0.21
AP3S1Q92572 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.39■□□□□ 0.21
AP3S1Q92572 AL031432.3-201ENST00000607698 485 ntBASIC16.39■□□□□ 0.21
AP3S1Q92572 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3S1Q92572 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3S1Q92572 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3S1Q92572 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3S1Q92572 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.39■□□□□ 0.21
AP3S1Q92572 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.39■□□□□ 0.21
AP3S1Q92572 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.39■□□□□ 0.21
AP3S1Q92572 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP3S1Q92572 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 AC108860.2-201ENST00000562760 2183 ntBASIC16.38■□□□□ 0.21
AP3S1Q92572 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 AC080080.1-201ENST00000625121 2420 ntBASIC16.38■□□□□ 0.21
AP3S1Q92572 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.38■□□□□ 0.21
AP3S1Q92572 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3S1Q92572 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.38■□□□□ 0.21
AP3S1Q92572 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms