Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERVK_113Q902F9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERVK_113Q902F9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.94■□□□□ 0.78
HERVK_113Q902F9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HERVK_113Q902F9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HERVK_113Q902F9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.94■□□□□ 0.78
HERVK_113Q902F9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 RPSAP43-201ENST00000402237 625 ntBASIC19.93■□□□□ 0.78
HERVK_113Q902F9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.93■□□□□ 0.78
HERVK_113Q902F9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HERVK_113Q902F9 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 TP73-AS1-210ENST00000637775 1455 ntBASIC19.92■□□□□ 0.78
HERVK_113Q902F9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 MED15P5-201ENST00000423150 992 ntBASIC19.92■□□□□ 0.78
HERVK_113Q902F9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 AL591424.1-201ENST00000442569 1213 ntBASIC19.92■□□□□ 0.78
HERVK_113Q902F9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERVK_113Q902F9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 GPX1P2-201ENST00000429271 606 ntBASIC19.91■□□□□ 0.78
HERVK_113Q902F9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 AC027796.2-201ENST00000575326 344 ntBASIC19.91■□□□□ 0.78
HERVK_113Q902F9 AC010327.4-202ENST00000591484 748 ntBASIC19.91■□□□□ 0.78
HERVK_113Q902F9 AP001269.4-201ENST00000609611 512 ntBASIC19.91■□□□□ 0.78
HERVK_113Q902F9 TCF3P1-201ENST00000423021 1937 ntBASIC19.91■□□□□ 0.78
HERVK_113Q902F9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HERVK_113Q902F9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
HERVK_113Q902F9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HERVK_113Q902F9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERVK_113Q902F9 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HERVK_113Q902F9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.9■□□□□ 0.78
HERVK_113Q902F9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.9■□□□□ 0.78
HERVK_113Q902F9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HERVK_113Q902F9 AC034105.1-201ENST00000563488 319 ntBASIC19.9■□□□□ 0.78
HERVK_113Q902F9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms