Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CT55Q8WUE5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
CT55Q8WUE5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CT55Q8WUE5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.33■□□□□ 0.36
CT55Q8WUE5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CT55Q8WUE5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CT55Q8WUE5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 LINC00167-201ENST00000530583 1419 ntBASIC17.32■□□□□ 0.36
CT55Q8WUE5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 AC233702.3-201ENST00000578656 1387 ntBASIC17.32■□□□□ 0.36
CT55Q8WUE5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 FDX1P1-201ENST00000449115 551 ntBASIC17.32■□□□□ 0.36
CT55Q8WUE5 KRT17P6-201ENST00000453795 1220 ntBASIC17.32■□□□□ 0.36
CT55Q8WUE5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 AC138894.3-201ENST00000603787 634 ntBASIC17.32■□□□□ 0.36
CT55Q8WUE5 AL592071.1-201ENST00000611956 408 ntBASIC17.32■□□□□ 0.36
CT55Q8WUE5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CT55Q8WUE5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.32■□□□□ 0.36
CT55Q8WUE5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CT55Q8WUE5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 KRT8P10-201ENST00000450021 1447 ntBASIC17.31■□□□□ 0.36
CT55Q8WUE5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CT55Q8WUE5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CT55Q8WUE5 KRT18P31-201ENST00000506277 1292 ntBASIC17.31■□□□□ 0.36
CT55Q8WUE5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CT55Q8WUE5 LINC01711-201ENST00000598340 967 ntBASIC17.31■□□□□ 0.36
CT55Q8WUE5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CT55Q8WUE5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.31■□□□□ 0.36
CT55Q8WUE5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CT55Q8WUE5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 AFG3L1P-217ENST00000557444 2447 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 AC007952.6-201ENST00000573168 2673 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 AC003957.1-201ENST00000625108 2673 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 GUSBP12-201ENST00000513727 720 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 Z69720.1-201ENST00000601483 472 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 AC124864.1-201ENST00000623408 392 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.3■□□□□ 0.36
CT55Q8WUE5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 AC093484.2-201ENST00000580996 2166 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CT55Q8WUE5 MTMR9LP-203ENST00000426597 1545 ntBASIC17.3■□□□□ 0.36
CT55Q8WUE5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms