Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 RCN1P2-201ENST00000398357 915 ntBASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 LINC01521-201ENST00000504184 1943 ntBASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 OR7E14P-202ENST00000530490 1290 ntBASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC002347.1-201ENST00000569543 541 ntBASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC092910.1-201ENST00000482027 1129 ntBASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 Z83851.2-201ENST00000609564 659 ntBASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ALMS1Q8TCU4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 KRT18P41-201ENST00000518924 1277 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 AL078644.1-201ENST00000609881 752 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 AC021087.4-201ENST00000563761 564 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 AC011467.2-201ENST00000598425 242 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 RPS2P28-201ENST00000314255 741 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 HLA-J-202ENST00000469281 1241 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 HLA-J-203ENST00000494367 1087 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 SPCS2P1-201ENST00000561636 679 ntBASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ALMS1Q8TCU4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 YBX1P5-201ENST00000509441 847 ntBASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ALMS1Q8TCU4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms