Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 KRT8P7-201ENST00000533003 1432 ntBASIC19.94■□□□□ 0.78
LMO3Q8TAP4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 AL163051.1-201ENST00000569214 1512 ntBASIC19.94■□□□□ 0.78
LMO3Q8TAP4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 AC093677.2-201ENST00000600169 1863 ntBASIC19.94■□□□□ 0.78
LMO3Q8TAP4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LMO3Q8TAP4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 SDHAP2-201ENST00000455183 2001 ntBASIC19.93■□□□□ 0.78
LMO3Q8TAP4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 AC099343.3-201ENST00000605834 2503 ntBASIC19.93■□□□□ 0.78
LMO3Q8TAP4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 KRT18P23-201ENST00000435622 1283 ntBASIC19.93■□□□□ 0.78
LMO3Q8TAP4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 LINC01568-207ENST00000641790 1380 ntBASIC19.93■□□□□ 0.78
LMO3Q8TAP4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.93■□□□□ 0.78
LMO3Q8TAP4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 ABALON-201ENST00000629058 1903 ntBASIC19.92■□□□□ 0.78
LMO3Q8TAP4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LMO3Q8TAP4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 HMGA1P5-201ENST00000412453 271 ntBASIC19.91■□□□□ 0.78
LMO3Q8TAP4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.91■□□□□ 0.78
LMO3Q8TAP4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 AC104390.1-201ENST00000555663 520 ntBASIC19.91■□□□□ 0.78
LMO3Q8TAP4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.91■□□□□ 0.78
LMO3Q8TAP4 AC145285.6-201ENST00000604632 637 ntBASIC19.91■□□□□ 0.78
LMO3Q8TAP4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms