Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 AL121912.1-201ENST00000603683 238 ntBASIC14.47□□□□□ -0.09
LINC01006Q8NI28 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01006Q8NI28 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 KRT16P4-201ENST00000453883 522 ntBASIC14.46□□□□□ -0.09
LINC01006Q8NI28 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 AC106795.1-205ENST00000512851 1056 ntBASIC14.46□□□□□ -0.09
LINC01006Q8NI28 AL662844.1-201ENST00000546340 181 ntBASIC14.46□□□□□ -0.09
LINC01006Q8NI28 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01006Q8NI28 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01006Q8NI28 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC01006Q8NI28 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01006Q8NI28 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC01006Q8NI28 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 SLC25A6P4-201ENST00000586535 553 ntBASIC14.45□□□□□ -0.1
LINC01006Q8NI28 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 AL357033.4-201ENST00000617703 1807 ntBASIC14.45□□□□□ -0.1
LINC01006Q8NI28 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 NSUN5P1-202ENST00000421140 1535 ntBASIC14.45□□□□□ -0.1
LINC01006Q8NI28 NSUN5P2-203ENST00000457352 1529 ntBASIC14.45□□□□□ -0.1
LINC01006Q8NI28 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01006Q8NI28 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 KRT8P50-201ENST00000562022 1438 ntBASIC14.44□□□□□ -0.1
LINC01006Q8NI28 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LINC01006Q8NI28 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms