Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 AL355075.4-201ENST00000554988 638 ntBASIC17.43■□□□□ 0.38
NUP43Q8NFH3 FITM1-202ENST00000559294 800 ntBASIC17.43■□□□□ 0.38
NUP43Q8NFH3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 KRT8P45-201ENST00000414328 1447 ntBASIC17.43■□□□□ 0.38
NUP43Q8NFH3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NUP43Q8NFH3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.42■□□□□ 0.38
NUP43Q8NFH3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 MIR564-202ENST00000385049 94 ntBASIC17.42■□□□□ 0.38
NUP43Q8NFH3 MIR1238-201ENST00000408483 83 ntBASIC17.42■□□□□ 0.38
NUP43Q8NFH3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 AL390955.1-201ENST00000428694 934 ntBASIC17.42■□□□□ 0.38
NUP43Q8NFH3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NUP43Q8NFH3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 SLC25A1P2-201ENST00000430693 912 ntBASIC17.41■□□□□ 0.38
NUP43Q8NFH3 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NUP43Q8NFH3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUP43Q8NFH3 TSPY17P-201ENST00000450329 467 ntBASIC17.4■□□□□ 0.38
NUP43Q8NFH3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms