Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 AL096865.1-201ENST00000606796 927 ntBASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCDC168Q8NDH2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 AC007967.2-201ENST00000432613 625 ntBASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 KRT89P-201ENST00000620027 1478 ntBASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 AC009237.14-201ENST00000609975 1594 ntBASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 UNC93B6-202ENST00000528242 690 ntBASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.5■□□□□ 0.07
CCDC168Q8NDH2 AC008556.1-201ENST00000610908 2040 ntBASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 AC011467.4-201ENST00000594891 528 ntBASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 AL078644.1-201ENST00000609881 752 ntBASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.49■□□□□ 0.07
CCDC168Q8NDH2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 AC079834.2-201ENST00000609776 1949 ntBASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 AL035252.4-201ENST00000624174 288 ntBASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 AC104390.1-201ENST00000555663 520 ntBASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CCDC168Q8NDH2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms