Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 AL158047.1-201ENST00000445918 881 ntBASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 AC097488.1-201ENST00000507834 756 ntBASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.18■□□□□ 0.98
LINC00301Q8NCQ3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 MCCD1P1-208ENST00000445732 328 ntBASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 CA15P1-201ENST00000481698 905 ntBASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 AL049637.2-201ENST00000641778 930 ntBASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LINC00301Q8NCQ3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LINC00301Q8NCQ3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 AC067852.2-201ENST00000590513 2313 ntBASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 AC020763.4-201ENST00000623414 4170 ntBASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 MIR4674-201ENST00000582457 87 ntBASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 AC008764.6-201ENST00000595909 2069 ntBASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 PCDHB18P-201ENST00000524813 2368 ntBASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LINC00301Q8NCQ3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00301Q8NCQ3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
LINC00301Q8NCQ3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00301Q8NCQ3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.14■□□□□ 0.98
LINC00301Q8NCQ3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00301Q8NCQ3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LINC00301Q8NCQ3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 Z99916.2-201ENST00000604037 246 ntBASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 AP001412.1-201ENST00000608405 714 ntBASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LINC00301Q8NCQ3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms