Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL3Q8N8U3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 RN7SL850P-201ENST00000579959 291 ntBASIC19.07■□□□□ 0.64
RTL3Q8N8U3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 AL023973.1-201ENST00000624619 620 ntBASIC19.07■□□□□ 0.64
RTL3Q8N8U3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL3Q8N8U3 MYLKP1-201ENST00000509077 1580 ntBASIC19.06■□□□□ 0.64
RTL3Q8N8U3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 SEC1P-202ENST00000473944 940 ntBASIC19.06■□□□□ 0.64
RTL3Q8N8U3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 AC104390.1-201ENST00000555663 520 ntBASIC19.06■□□□□ 0.64
RTL3Q8N8U3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 AC024243.1-201ENST00000609234 778 ntBASIC19.06■□□□□ 0.64
RTL3Q8N8U3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL3Q8N8U3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.05■□□□□ 0.64
RTL3Q8N8U3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 AC117947.1-201ENST00000427448 529 ntBASIC19.05■□□□□ 0.64
RTL3Q8N8U3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 AC139887.4-201ENST00000607877 719 ntBASIC19.05■□□□□ 0.64
RTL3Q8N8U3 AC006011.2-201ENST00000621313 1158 ntBASIC19.05■□□□□ 0.64
RTL3Q8N8U3 AL031432.5-201ENST00000641059 760 ntBASIC19.05■□□□□ 0.64
RTL3Q8N8U3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 WIZP1-201ENST00000531444 2299 ntBASIC19.05■□□□□ 0.64
RTL3Q8N8U3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.05■□□□□ 0.64
RTL3Q8N8U3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 YBX1P2-201ENST00000489612 999 ntBASIC19.04■□□□□ 0.64
RTL3Q8N8U3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 AC140113.3-201ENST00000605663 199 ntBASIC19.04■□□□□ 0.64
RTL3Q8N8U3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL3Q8N8U3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms