Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 AL359075.1-203ENST00000462729 1002 ntBASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC33Q8N5R6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC33Q8N5R6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC33Q8N5R6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC33Q8N5R6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC33Q8N5R6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC33Q8N5R6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC33Q8N5R6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 CA15P1-201ENST00000481698 905 ntBASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 AL441883.1-201ENST00000566170 1045 ntBASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 AL512604.3-201ENST00000569583 964 ntBASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC33Q8N5R6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AP000550.4-202ENST00000639755 178 ntBASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AL031432.5-201ENST00000641059 760 ntBASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC33Q8N5R6 KRT8P45-201ENST00000414328 1447 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms