Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCML4Q8N228 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCML4Q8N228 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCML4Q8N228 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCML4Q8N228 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.33■□□□□ 0.68
SCML4Q8N228 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SCML4Q8N228 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SCML4Q8N228 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
SCML4Q8N228 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.32■□□□□ 0.68
SCML4Q8N228 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.32■□□□□ 0.68
SCML4Q8N228 AL671277.2-201ENST00000458060 996 ntBASIC19.32■□□□□ 0.68
SCML4Q8N228 KRT18P35-201ENST00000510488 1269 ntBASIC19.32■□□□□ 0.68
SCML4Q8N228 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.32■□□□□ 0.68
SCML4Q8N228 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.32■□□□□ 0.68
SCML4Q8N228 AC009102.3-201ENST00000623118 1491 ntBASIC19.32■□□□□ 0.68
SCML4Q8N228 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SCML4Q8N228 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SCML4Q8N228 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SCML4Q8N228 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SCML4Q8N228 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SCML4Q8N228 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SCML4Q8N228 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCML4Q8N228 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SCML4Q8N228 AL391807.1-203ENST00000604392 2365 ntBASIC19.31■□□□□ 0.68
SCML4Q8N228 AC073592.3-201ENST00000625118 1834 ntBASIC19.31■□□□□ 0.68
SCML4Q8N228 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCML4Q8N228 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.31■□□□□ 0.68
SCML4Q8N228 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCML4Q8N228 AL136038.4-201ENST00000603606 1261 ntBASIC19.31■□□□□ 0.68
SCML4Q8N228 AL445228.2-201ENST00000605589 952 ntBASIC19.31■□□□□ 0.68
SCML4Q8N228 AC083849.1-201ENST00000615227 514 ntBASIC19.31■□□□□ 0.68
SCML4Q8N228 AL121956.5-201ENST00000625261 221 ntBASIC19.31■□□□□ 0.68
SCML4Q8N228 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCML4Q8N228 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCML4Q8N228 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCML4Q8N228 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SCML4Q8N228 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.31■□□□□ 0.68
SCML4Q8N228 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SCML4Q8N228 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCML4Q8N228 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.3■□□□□ 0.68
SCML4Q8N228 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SCML4Q8N228 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SCML4Q8N228 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCML4Q8N228 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
SCML4Q8N228 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.3■□□□□ 0.68
SCML4Q8N228 AC092597.1-201ENST00000487352 616 ntBASIC19.3■□□□□ 0.68
SCML4Q8N228 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.3■□□□□ 0.68
SCML4Q8N228 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.3■□□□□ 0.68
SCML4Q8N228 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.3■□□□□ 0.68
SCML4Q8N228 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.3■□□□□ 0.68
SCML4Q8N228 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.3■□□□□ 0.68
SCML4Q8N228 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.3■□□□□ 0.68
SCML4Q8N228 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.3■□□□□ 0.68
SCML4Q8N228 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.3■□□□□ 0.68
SCML4Q8N228 LINC01311-201ENST00000565162 1445 ntBASIC19.3■□□□□ 0.68
SCML4Q8N228 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCML4Q8N228 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCML4Q8N228 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCML4Q8N228 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCML4Q8N228 AC093503.3-201ENST00000624917 2352 ntBASIC19.29■□□□□ 0.68
SCML4Q8N228 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.29■□□□□ 0.68
SCML4Q8N228 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.29■□□□□ 0.68
SCML4Q8N228 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.29■□□□□ 0.68
SCML4Q8N228 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.29■□□□□ 0.68
SCML4Q8N228 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
SCML4Q8N228 ZNF444P1-201ENST00000559497 298 ntBASIC19.29■□□□□ 0.68
SCML4Q8N228 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.29■□□□□ 0.68
SCML4Q8N228 AL136038.3-201ENST00000561909 1096 ntBASIC19.29■□□□□ 0.68
SCML4Q8N228 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.29■□□□□ 0.68
SCML4Q8N228 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCML4Q8N228 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SCML4Q8N228 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCML4Q8N228 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms