Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 AL163051.1-201ENST00000569214 1512 ntBASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ARHGEF28Q8N1W1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 KRT16P4-201ENST00000453883 522 ntBASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 REXO1L6P-202ENST00000619970 1078 ntBASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ARHGEF28Q8N1W1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 AP002469.2-201ENST00000531724 424 ntBASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 AC005332.7-201ENST00000614046 2005 ntBASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC25.73■■□□□ 1.71
ARHGEF28Q8N1W1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 VENTXP7-201ENST00000475503 772 ntBASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ARHGEF28Q8N1W1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 SAPCD2P3-201ENST00000455031 850 ntBASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 AC106795.1-205ENST00000512851 1056 ntBASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 MRPL3P1-201ENST00000400109 1033 ntBASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 AP000347.1-202ENST00000435868 847 ntBASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 GXYLT1P4-201ENST00000613576 1192 ntBASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC25.71■■□□□ 1.71
ARHGEF28Q8N1W1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC25.7■■□□□ 1.71
ARHGEF28Q8N1W1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 GUSBP12-201ENST00000513727 720 ntBASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ARHGEF28Q8N1W1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC25.69■■□□□ 1.7
ARHGEF28Q8N1W1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms