Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 HTR7P1-201ENST00000538670 1336 ntBASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 MYLKP1-201ENST00000509077 1580 ntBASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AC138028.4-201ENST00000564984 1845 ntBASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 AC093677.2-201ENST00000600169 1863 ntBASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC01561Q8N1V8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 AC069152.1-201ENST00000438030 544 ntBASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 IKBKGP1-201ENST00000612193 1073 ntBASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC01561Q8N1V8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01561Q8N1V8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms