Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC27.52■■■□□ 2
ABCA6Q8N139 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC27.52■■■□□ 2
ABCA6Q8N139 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
ABCA6Q8N139 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC27.52■■■□□ 2
ABCA6Q8N139 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC27.52■■■□□ 2
ABCA6Q8N139 MTDHP3-201ENST00000594186 672 ntBASIC27.52■■■□□ 2
ABCA6Q8N139 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC27.52■■■□□ 2
ABCA6Q8N139 Z83851.2-201ENST00000609564 659 ntBASIC27.52■■■□□ 2
ABCA6Q8N139 ANKRD20A8P-203ENST00000641373 517 ntBASIC27.52■■■□□ 2
ABCA6Q8N139 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC27.52■■■□□ 2
ABCA6Q8N139 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
ABCA6Q8N139 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC27.51■■□□□ 1.99
ABCA6Q8N139 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
ABCA6Q8N139 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
ABCA6Q8N139 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC27.51■■□□□ 1.99
ABCA6Q8N139 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC27.51■■□□□ 1.99
ABCA6Q8N139 AC027601.4-201ENST00000611259 610 ntBASIC27.51■■□□□ 1.99
ABCA6Q8N139 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
ABCA6Q8N139 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC27.51■■□□□ 1.99
ABCA6Q8N139 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
ABCA6Q8N139 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ABCA6Q8N139 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ABCA6Q8N139 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ABCA6Q8N139 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 TP73-AS1-210ENST00000637775 1455 ntBASIC27.5■■□□□ 1.99
ABCA6Q8N139 UBQLN4P1-201ENST00000461599 1801 ntBASIC27.5■■□□□ 1.99
ABCA6Q8N139 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ABCA6Q8N139 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 RPS2P1-201ENST00000434010 821 ntBASIC27.5■■□□□ 1.99
ABCA6Q8N139 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 AC027796.2-201ENST00000575326 344 ntBASIC27.5■■□□□ 1.99
ABCA6Q8N139 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
ABCA6Q8N139 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
ABCA6Q8N139 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC27.5■■□□□ 1.99
ABCA6Q8N139 IRX1P1-201ENST00000438849 1838 ntBASIC27.5■■□□□ 1.99
ABCA6Q8N139 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 AL591424.1-201ENST00000442569 1213 ntBASIC27.49■■□□□ 1.99
ABCA6Q8N139 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 INTS4P1-201ENST00000438455 1935 ntBASIC27.49■■□□□ 1.99
ABCA6Q8N139 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC27.49■■□□□ 1.99
ABCA6Q8N139 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
ABCA6Q8N139 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 KRT18P41-201ENST00000518924 1277 ntBASIC27.48■■□□□ 1.99
ABCA6Q8N139 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC27.48■■□□□ 1.99
ABCA6Q8N139 PNMT-203ENST00000581428 677 ntTSL 2 BASIC27.48■■□□□ 1.99
ABCA6Q8N139 AC025062.2-201ENST00000605477 670 ntBASIC27.48■■□□□ 1.99
ABCA6Q8N139 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 NARF-204ENST00000390006 1766 ntTSL 2 BASIC27.48■■□□□ 1.99
ABCA6Q8N139 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
ABCA6Q8N139 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
ABCA6Q8N139 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
ABCA6Q8N139 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
ABCA6Q8N139 FIS1-203ENST00000442303 631 ntTSL 3 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms