Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 AP005242.2-201ENST00000580065 1175 ntBASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 AP000525.1-201ENST00000608286 694 ntBASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 AC008556.1-201ENST00000610908 2040 ntBASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 AC079598.2-202ENST00000546624 1451 ntBASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CPNE9Q8IYJ1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 GPAT2P1-201ENST00000444924 1672 ntBASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 AL390955.1-201ENST00000428694 934 ntBASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CPNE9Q8IYJ1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 AL023284.2-201ENST00000405850 579 ntBASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 AL355075.4-201ENST00000554988 638 ntBASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 AL109659.2-201ENST00000606809 1674 ntBASIC18.41■□□□□ 0.54
CPNE9Q8IYJ1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 CA15P1-201ENST00000481698 905 ntBASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 MIR4497-201ENST00000583208 89 ntBASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE9Q8IYJ1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms