Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.77■□□□□ 0.44
RAB43Q86YS6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB43Q86YS6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB43Q86YS6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB43Q86YS6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB43Q86YS6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB43Q86YS6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB43Q86YS6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.77■□□□□ 0.43
RAB43Q86YS6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
RAB43Q86YS6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RAB43Q86YS6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB43Q86YS6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 AC020916.1-201ENST00000587762 1774 ntBASIC17.75■□□□□ 0.43
RAB43Q86YS6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB43Q86YS6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB43Q86YS6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 TSPY23P-201ENST00000440136 739 ntBASIC17.74■□□□□ 0.43
RAB43Q86YS6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB43Q86YS6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB43Q86YS6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms