Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
C9orf139Q6ZV77 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.02■□□□□ -0
C9orf139Q6ZV77 AC007952.6-201ENST00000573168 2673 ntBASIC15.02■□□□□ -0
C9orf139Q6ZV77 AC003957.1-201ENST00000625108 2673 ntBASIC15.02■□□□□ -0
C9orf139Q6ZV77 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.02■□□□□ -0
C9orf139Q6ZV77 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.02■□□□□ -0
C9orf139Q6ZV77 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
C9orf139Q6ZV77 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.02■□□□□ -0
C9orf139Q6ZV77 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.02■□□□□ -0
C9orf139Q6ZV77 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.02■□□□□ -0
C9orf139Q6ZV77 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
C9orf139Q6ZV77 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
C9orf139Q6ZV77 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
C9orf139Q6ZV77 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.02□□□□□ -0.01
C9orf139Q6ZV77 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
C9orf139Q6ZV77 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 AP002383.4-201ENST00000442518 975 ntBASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 AC009065.1-201ENST00000564055 1225 ntBASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
C9orf139Q6ZV77 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 TSPY22P-201ENST00000427496 604 ntBASIC15□□□□□ -0.01
C9orf139Q6ZV77 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 AC068587.9-201ENST00000641814 219 ntBASIC15□□□□□ -0.01
C9orf139Q6ZV77 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15□□□□□ -0.01
C9orf139Q6ZV77 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15□□□□□ -0.01
C9orf139Q6ZV77 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
C9orf139Q6ZV77 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms