Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PPP4R3AQ6IN85 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 BCL2-203ENST00000589955 5011 ntBASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPP4R3AQ6IN85 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 AC112497.1-201ENST00000624824 639 ntBASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 AC112777.1-201ENST00000540175 1423 ntBASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.11■□□□□ 0.97
PPP4R3AQ6IN85 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 AP000593.1-201ENST00000393668 712 ntBASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 KRT18P23-201ENST00000435622 1283 ntBASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 KRT18P57-201ENST00000443599 1254 ntBASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 AL031432.5-201ENST00000641059 760 ntBASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 AL138781.2-201ENST00000617896 1843 ntBASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.1■□□□□ 0.97
PPP4R3AQ6IN85 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms