Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 AP001094.4-201ENST00000579008 2176 ntBASIC17.56■□□□□ 0.4
LPCAT4Q643R3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LPCAT4Q643R3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.55■□□□□ 0.4
LPCAT4Q643R3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 AL355472.2-201ENST00000422958 438 ntBASIC17.55■□□□□ 0.4
LPCAT4Q643R3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 CYP2T3P-201ENST00000601990 817 ntBASIC17.55■□□□□ 0.4
LPCAT4Q643R3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LPCAT4Q643R3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 KRT19P1-201ENST00000405746 1186 ntBASIC17.54■□□□□ 0.4
LPCAT4Q643R3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LPCAT4Q643R3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 MTMR9LP-203ENST00000426597 1545 ntBASIC17.53■□□□□ 0.4
LPCAT4Q643R3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.53■□□□□ 0.4
LPCAT4Q643R3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LPCAT4Q643R3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms