Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 GPAT2P1-201ENST00000444924 1672 ntBASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 AC020763.4-201ENST00000623414 4170 ntBASIC19.39■□□□□ 0.69
TTC39BQ5VTQ0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 AL023284.2-201ENST00000405850 579 ntBASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 KRT8P45-201ENST00000414328 1447 ntBASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 AL512353.2-201ENST00000448759 1962 ntBASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 AC141257.4-201ENST00000634557 245 ntBASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 AC136944.6-201ENST00000634818 245 ntBASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC39BQ5VTQ0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 AL031598.1-201ENST00000561511 1773 ntBASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 NEK4P2-201ENST00000580004 1012 ntBASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 AC009113.1-201ENST00000570267 2443 ntBASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 AC104581.1-202ENST00000635932 2618 ntBASIC19.37■□□□□ 0.69
TTC39BQ5VTQ0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 MIR3180-5-201ENST00000583743 153 ntBASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 CR769767.2-201ENST00000622735 460 ntBASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 AL031432.5-201ENST00000641059 760 ntBASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 AL109659.2-201ENST00000606809 1674 ntBASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 AC093525.10-201ENST00000625130 1569 ntBASIC19.36■□□□□ 0.69
TTC39BQ5VTQ0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC39BQ5VTQ0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC39BQ5VTQ0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC39BQ5VTQ0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
TTC39BQ5VTQ0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC39BQ5VTQ0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TTC39BQ5VTQ0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.35■□□□□ 0.69
TTC39BQ5VTQ0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms