Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC114341.1-201ENST00000618070 349 ntBASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CDC42BPAQ5VT25 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 MIR149-201ENST00000384879 89 ntBASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 AL590627.1-203ENST00000421194 1026 ntBASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 MINOS1P3-201ENST00000457048 203 ntBASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 PAM16-208ENST00000573553 722 ntTSL 2 BASIC28.12■■■□□ 2.09
CDC42BPAQ5VT25 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 MED22-202ENST00000371999 987 ntTSL 3 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 TLE1-202ENST00000376484 666 ntTSL 3 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 AF228730.7-201ENST00000641842 219 ntBASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CDC42BPAQ5VT25 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 ME2-218ENST00000640965 2476 ntTSL 5 BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 AC011840.4-201ENST00000578471 627 ntBASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 ANKRD20A8P-203ENST00000641373 517 ntBASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CDC42BPAQ5VT25 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 AL138831.2-201ENST00000606564 490 ntBASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 FAM197Y8-203ENST00000450145 560 ntBASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CDC42BPAQ5VT25 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 AL031284.1-201ENST00000419297 478 ntBASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 FGFR3P6-201ENST00000457012 610 ntBASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
CDC42BPAQ5VT25 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC28.07■■■□□ 2.08
CDC42BPAQ5VT25 EFS-203ENST00000429593 2610 ntTSL 2 BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms