Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.21■□□□□ 0.67
SCAPQ12770 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SCAPQ12770 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SCAPQ12770 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCAPQ12770 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SCAPQ12770 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAPQ12770 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.2■□□□□ 0.66
SCAPQ12770 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.2■□□□□ 0.66
SCAPQ12770 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 MIR3180-4-201ENST00000582223 153 ntBASIC19.2■□□□□ 0.66
SCAPQ12770 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAPQ12770 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAPQ12770 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAPQ12770 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.2■□□□□ 0.66
SCAPQ12770 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.2■□□□□ 0.66
SCAPQ12770 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.2■□□□□ 0.66
SCAPQ12770 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCAPQ12770 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.19■□□□□ 0.66
SCAPQ12770 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.19■□□□□ 0.66
SCAPQ12770 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SCAPQ12770 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
SCAPQ12770 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.19■□□□□ 0.66
SCAPQ12770 SEC1P-202ENST00000473944 940 ntBASIC19.19■□□□□ 0.66
SCAPQ12770 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.19■□□□□ 0.66
SCAPQ12770 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.19■□□□□ 0.66
SCAPQ12770 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.19■□□□□ 0.66
SCAPQ12770 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.19■□□□□ 0.66
SCAPQ12770 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.19■□□□□ 0.66
SCAPQ12770 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 AC005082.1-201ENST00000413042 2259 ntBASIC19.19■□□□□ 0.66
SCAPQ12770 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SCAPQ12770 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SCAPQ12770 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.19■□□□□ 0.66
SCAPQ12770 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCAPQ12770 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCAPQ12770 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.19■□□□□ 0.66
SCAPQ12770 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.19■□□□□ 0.66
SCAPQ12770 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCAPQ12770 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAPQ12770 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAPQ12770 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.18■□□□□ 0.66
SCAPQ12770 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.18■□□□□ 0.66
SCAPQ12770 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.18■□□□□ 0.66
SCAPQ12770 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.18■□□□□ 0.66
SCAPQ12770 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SCAPQ12770 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.18■□□□□ 0.66
SCAPQ12770 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SCAPQ12770 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAPQ12770 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAPQ12770 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.18■□□□□ 0.66
SCAPQ12770 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SCAPQ12770 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms