Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE3AQ05086 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
UBE3AQ05086 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3AQ05086 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
UBE3AQ05086 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3AQ05086 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3AQ05086 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.68■□□□□ 0.74
UBE3AQ05086 AL590627.1-203ENST00000421194 1026 ntBASIC19.68■□□□□ 0.74
UBE3AQ05086 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 AC011840.4-201ENST00000578471 627 ntBASIC19.68■□□□□ 0.74
UBE3AQ05086 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.68■□□□□ 0.74
UBE3AQ05086 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
UBE3AQ05086 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBE3AQ05086 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3AQ05086 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
UBE3AQ05086 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3AQ05086 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3AQ05086 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.67■□□□□ 0.74
UBE3AQ05086 NUS1P2-201ENST00000417358 873 ntBASIC19.67■□□□□ 0.74
UBE3AQ05086 TSPY12P-201ENST00000421279 868 ntBASIC19.67■□□□□ 0.74
UBE3AQ05086 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.67■□□□□ 0.74
UBE3AQ05086 AF238378.1-201ENST00000526806 358 ntBASIC19.67■□□□□ 0.74
UBE3AQ05086 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBE3AQ05086 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.67■□□□□ 0.74
UBE3AQ05086 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
UBE3AQ05086 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.67■□□□□ 0.74
UBE3AQ05086 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBE3AQ05086 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBE3AQ05086 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE3AQ05086 AP000593.1-201ENST00000393668 712 ntBASIC19.66■□□□□ 0.74
UBE3AQ05086 PMS2P1-201ENST00000431037 1228 ntBASIC19.66■□□□□ 0.74
UBE3AQ05086 MINOS1P3-201ENST00000457048 203 ntBASIC19.66■□□□□ 0.74
UBE3AQ05086 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
UBE3AQ05086 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE3AQ05086 AP001005.1-201ENST00000571755 1248 ntBASIC19.66■□□□□ 0.74
UBE3AQ05086 AP005901.3-202ENST00000581653 237 ntBASIC19.66■□□□□ 0.74
UBE3AQ05086 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UBE3AQ05086 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.66■□□□□ 0.74
UBE3AQ05086 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.66■□□□□ 0.74
UBE3AQ05086 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
UBE3AQ05086 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.66■□□□□ 0.74
UBE3AQ05086 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBE3AQ05086 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.66■□□□□ 0.74
UBE3AQ05086 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE3AQ05086 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE3AQ05086 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE3AQ05086 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UBE3AQ05086 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE3AQ05086 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.65■□□□□ 0.74
UBE3AQ05086 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.65■□□□□ 0.74
UBE3AQ05086 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE3AQ05086 AL671883.3-201ENST00000603274 991 ntBASIC19.65■□□□□ 0.74
UBE3AQ05086 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE3AQ05086 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
UBE3AQ05086 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.65■□□□□ 0.74
UBE3AQ05086 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
UBE3AQ05086 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBE3AQ05086 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.65■□□□□ 0.74
UBE3AQ05086 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms