Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.67□□□□□ -0.06
CCL20P78556 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL20P78556 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CCL20P78556 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL20P78556 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.67□□□□□ -0.06
CCL20P78556 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.67□□□□□ -0.06
CCL20P78556 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.67□□□□□ -0.06
CCL20P78556 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
CCL20P78556 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL20P78556 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 HEIH-201ENST00000623091 1652 ntBASIC14.67□□□□□ -0.06
CCL20P78556 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CCL20P78556 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.67□□□□□ -0.06
CCL20P78556 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL20P78556 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL20P78556 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL20P78556 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CCL20P78556 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL20P78556 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL20P78556 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CCL20P78556 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 EDA-201ENST00000338901 1233 ntBASIC14.66□□□□□ -0.06
CCL20P78556 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL20P78556 AC091305.1-201ENST00000479476 895 ntBASIC14.66□□□□□ -0.06
CCL20P78556 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL20P78556 C2orf69P4-201ENST00000565394 541 ntBASIC14.66□□□□□ -0.06
CCL20P78556 AL162412.1-201ENST00000567129 965 ntBASIC14.66□□□□□ -0.06
CCL20P78556 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.66□□□□□ -0.06
CCL20P78556 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL20P78556 TERF1P2-201ENST00000583350 1212 ntBASIC14.66□□□□□ -0.06
CCL20P78556 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CCL20P78556 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.66□□□□□ -0.06
CCL20P78556 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC14.66□□□□□ -0.06
CCL20P78556 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.66□□□□□ -0.06
CCL20P78556 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CCL20P78556 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CCL20P78556 AL162727.3-201ENST00000635661 2787 ntBASIC14.66□□□□□ -0.06
CCL20P78556 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 FLJ13224-201ENST00000313737 1514 ntBASIC14.66□□□□□ -0.06
CCL20P78556 AC004854.2-201ENST00000608450 1441 ntBASIC14.66□□□□□ -0.06
CCL20P78556 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CCL20P78556 LINC00602-201ENST00000629776 2065 ntBASIC14.65□□□□□ -0.06
CCL20P78556 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.65□□□□□ -0.06
CCL20P78556 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.65□□□□□ -0.06
CCL20P78556 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CCL20P78556 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL20P78556 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL20P78556 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL20P78556 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.65□□□□□ -0.06
CCL20P78556 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.65□□□□□ -0.06
CCL20P78556 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CCL20P78556 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCL20P78556 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.65□□□□□ -0.06
CCL20P78556 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CCL20P78556 AL136967.2-201ENST00000623968 743 ntBASIC14.65□□□□□ -0.06
CCL20P78556 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CCL20P78556 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms