Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SEC61A1P61619 MIR4785-201ENST00000585005 73 ntBASIC16.3■□□□□ 0.2
SEC61A1P61619 AC026471.5-201ENST00000615068 467 ntBASIC16.3■□□□□ 0.2
SEC61A1P61619 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SEC61A1P61619 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
SEC61A1P61619 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.3■□□□□ 0.2
SEC61A1P61619 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SEC61A1P61619 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SEC61A1P61619 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SEC61A1P61619 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SEC61A1P61619 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.29■□□□□ 0.2
SEC61A1P61619 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.29■□□□□ 0.2
SEC61A1P61619 AL161938.1-201ENST00000569833 2180 ntBASIC16.29■□□□□ 0.2
SEC61A1P61619 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SEC61A1P61619 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SEC61A1P61619 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.29■□□□□ 0.2
SEC61A1P61619 AC073195.1-201ENST00000607241 877 ntBASIC16.29■□□□□ 0.2
SEC61A1P61619 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.29■□□□□ 0.2
SEC61A1P61619 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SEC61A1P61619 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.29■□□□□ 0.2
SEC61A1P61619 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SEC61A1P61619 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
SEC61A1P61619 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SEC61A1P61619 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.28■□□□□ 0.2
SEC61A1P61619 KRT17P2-201ENST00000300992 1314 ntBASIC16.28■□□□□ 0.2
SEC61A1P61619 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SEC61A1P61619 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SEC61A1P61619 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.28■□□□□ 0.2
SEC61A1P61619 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.28■□□□□ 0.2
SEC61A1P61619 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.28■□□□□ 0.2
SEC61A1P61619 C1QL1P1-201ENST00000568105 661 ntBASIC16.28■□□□□ 0.2
SEC61A1P61619 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SEC61A1P61619 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SEC61A1P61619 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SEC61A1P61619 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61A1P61619 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.28■□□□□ 0.2
SEC61A1P61619 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.28■□□□□ 0.2
SEC61A1P61619 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 AC099398.1-201ENST00000567919 2776 ntBASIC16.27■□□□□ 0.2
SEC61A1P61619 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.27■□□□□ 0.2
SEC61A1P61619 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.27■□□□□ 0.2
SEC61A1P61619 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
SEC61A1P61619 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEC61A1P61619 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms