Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PAX9P55771 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.95□□□□□ -0.02
PAX9P55771 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.95□□□□□ -0.02
PAX9P55771 AC091874.3-201ENST00000512672 1195 ntBASIC14.95□□□□□ -0.02
PAX9P55771 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.95□□□□□ -0.02
PAX9P55771 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PAX9P55771 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.95□□□□□ -0.02
PAX9P55771 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.95□□□□□ -0.02
PAX9P55771 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PAX9P55771 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PAX9P55771 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PAX9P55771 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.95□□□□□ -0.02
PAX9P55771 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PAX9P55771 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PAX9P55771 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PAX9P55771 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PAX9P55771 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.95□□□□□ -0.02
PAX9P55771 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.95□□□□□ -0.02
PAX9P55771 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.95□□□□□ -0.02
PAX9P55771 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.95□□□□□ -0.02
PAX9P55771 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.94□□□□□ -0.02
PAX9P55771 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PAX9P55771 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.94□□□□□ -0.02
PAX9P55771 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.94□□□□□ -0.02
PAX9P55771 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
PAX9P55771 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PAX9P55771 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.94□□□□□ -0.02
PAX9P55771 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.94□□□□□ -0.02
PAX9P55771 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.94□□□□□ -0.02
PAX9P55771 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.94□□□□□ -0.02
PAX9P55771 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.94□□□□□ -0.02
PAX9P55771 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.94□□□□□ -0.02
PAX9P55771 AL121832.2-201ENST00000610979 668 ntBASIC14.94□□□□□ -0.02
PAX9P55771 HLA-B-256ENST00000639848 1089 ntBASIC14.94□□□□□ -0.02
PAX9P55771 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PAX9P55771 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PAX9P55771 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.94□□□□□ -0.02
PAX9P55771 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.93□□□□□ -0.02
PAX9P55771 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PAX9P55771 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.93□□□□□ -0.02
PAX9P55771 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PAX9P55771 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 MIR663A-201ENST00000385250 93 ntBASIC14.93□□□□□ -0.02
PAX9P55771 POU5F1P3-201ENST00000428824 1078 ntBASIC14.93□□□□□ -0.02
PAX9P55771 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.93□□□□□ -0.02
PAX9P55771 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.93□□□□□ -0.02
PAX9P55771 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.93□□□□□ -0.02
PAX9P55771 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 PP12613-201ENST00000424958 2230 ntBASIC14.93□□□□□ -0.02
PAX9P55771 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PAX9P55771 AC106820.2-201ENST00000563775 3264 ntBASIC14.93□□□□□ -0.02
PAX9P55771 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PAX9P55771 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PAX9P55771 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PAX9P55771 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.92□□□□□ -0.02
PAX9P55771 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.92□□□□□ -0.02
PAX9P55771 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.92□□□□□ -0.02
PAX9P55771 AC092118.2-201ENST00000613495 667 ntBASIC14.92□□□□□ -0.02
PAX9P55771 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC14.92□□□□□ -0.02
PAX9P55771 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PAX9P55771 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PAX9P55771 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms