Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.08■□□□□ 0.32
CDH11P55287 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.08■□□□□ 0.32
CDH11P55287 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDH11P55287 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH11P55287 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 AC068880.1-201ENST00000507289 2297 ntBASIC17.08■□□□□ 0.32
CDH11P55287 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH11P55287 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH11P55287 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDH11P55287 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
CDH11P55287 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH11P55287 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDH11P55287 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDH11P55287 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH11P55287 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH11P55287 AF186192.3-201ENST00000583427 947 ntBASIC17.07■□□□□ 0.32
CDH11P55287 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH11P55287 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 OR6D1P-202ENST00000641007 5290 ntBASIC17.07■□□□□ 0.32
CDH11P55287 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH11P55287 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDH11P55287 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CDH11P55287 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH11P55287 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CDH11P55287 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDH11P55287 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH11P55287 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 BX088651.1-201ENST00000540551 451 ntBASIC17.06■□□□□ 0.32
CDH11P55287 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CDH11P55287 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDH11P55287 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH11P55287 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH11P55287 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH11P55287 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH11P55287 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH11P55287 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH11P55287 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDH11P55287 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.06■□□□□ 0.32
CDH11P55287 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.06■□□□□ 0.32
CDH11P55287 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CDH11P55287 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
CDH11P55287 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDH11P55287 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.05■□□□□ 0.32
CDH11P55287 AP002982.1-201ENST00000492365 877 ntBASIC17.05■□□□□ 0.32
CDH11P55287 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.05■□□□□ 0.32
CDH11P55287 AC026471.5-201ENST00000615068 467 ntBASIC17.05■□□□□ 0.32
CDH11P55287 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 AC073592.3-201ENST00000625118 1834 ntBASIC17.05■□□□□ 0.32
CDH11P55287 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDH11P55287 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms