Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.03■□□□□ 0.96
USP11P51784 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
USP11P51784 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP11P51784 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
USP11P51784 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.03■□□□□ 0.96
USP11P51784 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP11P51784 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.02■□□□□ 0.96
USP11P51784 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
USP11P51784 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
USP11P51784 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 AC093503.3-201ENST00000624917 2352 ntBASIC21.02■□□□□ 0.96
USP11P51784 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
USP11P51784 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
USP11P51784 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 MIR1224-201ENST00000408193 85 ntBASIC21.02■□□□□ 0.96
USP11P51784 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.02■□□□□ 0.96
USP11P51784 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
USP11P51784 AC010331.1-201ENST00000611423 582 ntBASIC21.02■□□□□ 0.96
USP11P51784 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP11P51784 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP11P51784 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP11P51784 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP11P51784 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
USP11P51784 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.01■□□□□ 0.95
USP11P51784 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
USP11P51784 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.01■□□□□ 0.95
USP11P51784 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.01■□□□□ 0.95
USP11P51784 KRT18P38-201ENST00000449496 1282 ntBASIC21.01■□□□□ 0.95
USP11P51784 AC009065.1-201ENST00000564055 1225 ntBASIC21.01■□□□□ 0.95
USP11P51784 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.01■□□□□ 0.95
USP11P51784 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.01■□□□□ 0.95
USP11P51784 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.01■□□□□ 0.95
USP11P51784 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
USP11P51784 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.01■□□□□ 0.95
USP11P51784 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP11P51784 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21■□□□□ 0.95
USP11P51784 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21■□□□□ 0.95
USP11P51784 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21■□□□□ 0.95
USP11P51784 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21■□□□□ 0.95
USP11P51784 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21■□□□□ 0.95
USP11P51784 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21■□□□□ 0.95
USP11P51784 AL157888.1-201ENST00000631930 593 ntBASIC21■□□□□ 0.95
USP11P51784 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
USP11P51784 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
USP11P51784 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
USP11P51784 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
USP11P51784 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21■□□□□ 0.95
USP11P51784 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
USP11P51784 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21■□□□□ 0.95
USP11P51784 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
USP11P51784 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
USP11P51784 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
USP11P51784 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 SPDYE15P-201ENST00000424157 909 ntBASIC20.99■□□□□ 0.95
USP11P51784 AL359075.1-203ENST00000462729 1002 ntBASIC20.99■□□□□ 0.95
USP11P51784 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.99■□□□□ 0.95
USP11P51784 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
USP11P51784 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
USP11P51784 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms