Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.61■□□□□ 0.89
CPT1AP50416 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CPT1AP50416 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CPT1AP50416 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
CPT1AP50416 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPT1AP50416 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.6■□□□□ 0.89
CPT1AP50416 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 NSUN5P1-202ENST00000421140 1535 ntBASIC20.6■□□□□ 0.89
CPT1AP50416 NSUN5P2-203ENST00000457352 1529 ntBASIC20.6■□□□□ 0.89
CPT1AP50416 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CPT1AP50416 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CPT1AP50416 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.6■□□□□ 0.89
CPT1AP50416 AP002469.2-201ENST00000531724 424 ntBASIC20.6■□□□□ 0.89
CPT1AP50416 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.6■□□□□ 0.89
CPT1AP50416 AL662844.1-201ENST00000546340 181 ntBASIC20.6■□□□□ 0.89
CPT1AP50416 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.6■□□□□ 0.89
CPT1AP50416 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.6■□□□□ 0.89
CPT1AP50416 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.6■□□□□ 0.89
CPT1AP50416 AL121912.1-201ENST00000603683 238 ntBASIC20.6■□□□□ 0.89
CPT1AP50416 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.6■□□□□ 0.89
CPT1AP50416 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.6■□□□□ 0.89
CPT1AP50416 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.6■□□□□ 0.89
CPT1AP50416 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.6■□□□□ 0.89
CPT1AP50416 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPT1AP50416 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.6■□□□□ 0.89
CPT1AP50416 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.59■□□□□ 0.89
CPT1AP50416 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.59■□□□□ 0.89
CPT1AP50416 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.59■□□□□ 0.89
CPT1AP50416 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.59■□□□□ 0.89
CPT1AP50416 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CPT1AP50416 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.59■□□□□ 0.89
CPT1AP50416 AP000347.1-202ENST00000435868 847 ntBASIC20.59■□□□□ 0.89
CPT1AP50416 AC106795.1-205ENST00000512851 1056 ntBASIC20.59■□□□□ 0.89
CPT1AP50416 KRT18P41-201ENST00000518924 1277 ntBASIC20.59■□□□□ 0.89
CPT1AP50416 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.59■□□□□ 0.89
CPT1AP50416 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.59■□□□□ 0.89
CPT1AP50416 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 AL158211.5-201ENST00000623583 2518 ntBASIC20.59■□□□□ 0.89
CPT1AP50416 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPT1AP50416 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CPT1AP50416 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.58■□□□□ 0.89
CPT1AP50416 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 KRT16P4-201ENST00000453883 522 ntBASIC20.58■□□□□ 0.89
CPT1AP50416 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.58■□□□□ 0.89
CPT1AP50416 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.58■□□□□ 0.89
CPT1AP50416 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CPT1AP50416 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.58■□□□□ 0.89
CPT1AP50416 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.58■□□□□ 0.89
CPT1AP50416 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.58■□□□□ 0.89
CPT1AP50416 AC011840.4-201ENST00000578471 627 ntBASIC20.58■□□□□ 0.89
CPT1AP50416 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.58■□□□□ 0.89
CPT1AP50416 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.58■□□□□ 0.89
CPT1AP50416 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.58■□□□□ 0.89
CPT1AP50416 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPT1AP50416 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPT1AP50416 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.58■□□□□ 0.88
CPT1AP50416 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPT1AP50416 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPT1AP50416 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPT1AP50416 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPT1AP50416 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPT1AP50416 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.58■□□□□ 0.88
CPT1AP50416 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CPT1AP50416 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.58■□□□□ 0.88
CPT1AP50416 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.58■□□□□ 0.88
CPT1AP50416 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.58■□□□□ 0.88
CPT1AP50416 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.57■□□□□ 0.88
CPT1AP50416 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.57■□□□□ 0.88
CPT1AP50416 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPT1AP50416 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CPT1AP50416 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms