Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC112482.1-201ENST00000492080 688 ntBASIC20.97■□□□□ 0.95
CENPFP49454 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.97■□□□□ 0.95
CENPFP49454 AP001269.4-201ENST00000609611 512 ntBASIC20.97■□□□□ 0.95
CENPFP49454 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.97■□□□□ 0.95
CENPFP49454 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.97■□□□□ 0.95
CENPFP49454 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CENPFP49454 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPFP49454 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CENPFP49454 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CENPFP49454 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.97■□□□□ 0.95
CENPFP49454 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.96■□□□□ 0.95
CENPFP49454 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
CENPFP49454 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CENPFP49454 AP006288.1-201ENST00000446065 395 ntBASIC20.96■□□□□ 0.95
CENPFP49454 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.96■□□□□ 0.95
CENPFP49454 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.96■□□□□ 0.95
CENPFP49454 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 AL512353.2-201ENST00000448759 1962 ntBASIC20.96■□□□□ 0.95
CENPFP49454 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.96■□□□□ 0.95
CENPFP49454 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.96■□□□□ 0.95
CENPFP49454 RPS8P6-201ENST00000426177 609 ntBASIC20.96■□□□□ 0.95
CENPFP49454 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.96■□□□□ 0.95
CENPFP49454 AL356488.2-201ENST00000602755 427 ntBASIC20.96■□□□□ 0.95
CENPFP49454 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CENPFP49454 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.95■□□□□ 0.95
CENPFP49454 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CENPFP49454 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CENPFP49454 LINC01521-201ENST00000504184 1943 ntBASIC20.95■□□□□ 0.94
CENPFP49454 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 HLA-J-202ENST00000469281 1241 ntBASIC20.95■□□□□ 0.94
CENPFP49454 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.95■□□□□ 0.94
CENPFP49454 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.95■□□□□ 0.94
CENPFP49454 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.95■□□□□ 0.94
CENPFP49454 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.95■□□□□ 0.94
CENPFP49454 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.95■□□□□ 0.94
CENPFP49454 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CENPFP49454 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 AL355877.3-201ENST00000622820 899 ntBASIC20.95■□□□□ 0.94
CENPFP49454 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CENPFP49454 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CENPFP49454 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPFP49454 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.94■□□□□ 0.94
CENPFP49454 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.94■□□□□ 0.94
CENPFP49454 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.94■□□□□ 0.94
CENPFP49454 FGFR3P6-201ENST00000457012 610 ntBASIC20.94■□□□□ 0.94
CENPFP49454 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.94■□□□□ 0.94
CENPFP49454 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.94■□□□□ 0.94
CENPFP49454 MIR5100-201ENST00000579544 119 ntBASIC20.94■□□□□ 0.94
CENPFP49454 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPFP49454 AC005336.2-201ENST00000593183 939 ntBASIC20.94■□□□□ 0.94
CENPFP49454 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CENPFP49454 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CENPFP49454 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.94■□□□□ 0.94
CENPFP49454 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.94■□□□□ 0.94
CENPFP49454 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.94■□□□□ 0.94
CENPFP49454 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.93■□□□□ 0.94
CENPFP49454 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
CENPFP49454 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.93■□□□□ 0.94
CENPFP49454 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.93■□□□□ 0.94
CENPFP49454 FAM8A3P-201ENST00000427218 844 ntBASIC20.93■□□□□ 0.94
CENPFP49454 MIR3687-2-201ENST00000577708 61 ntBASIC20.93■□□□□ 0.94
CENPFP49454 MIR3687-1-201ENST00000614492 61 ntBASIC20.93■□□□□ 0.94
CENPFP49454 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.93■□□□□ 0.94
CENPFP49454 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 AC125437.2-201ENST00000625180 2167 ntBASIC20.93■□□□□ 0.94
CENPFP49454 AC004817.3-201ENST00000602957 2129 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms