Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CKBP1-201ENST00000565489 1086 ntBASIC19.38■□□□□ 0.69
MMP13P45452 SLC25A1P4-201ENST00000567977 778 ntBASIC19.38■□□□□ 0.69
MMP13P45452 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP13P45452 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
MMP13P45452 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MMP13P45452 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP13P45452 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP13P45452 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP13P45452 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP13P45452 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP13P45452 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 UNC93B2-201ENST00000285383 730 ntBASIC19.37■□□□□ 0.69
MMP13P45452 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
MMP13P45452 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.37■□□□□ 0.69
MMP13P45452 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 AC097488.1-201ENST00000507834 756 ntBASIC19.37■□□□□ 0.69
MMP13P45452 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
MMP13P45452 AL355075.4-201ENST00000554988 638 ntBASIC19.37■□□□□ 0.69
MMP13P45452 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP13P45452 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP13P45452 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP13P45452 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MMP13P45452 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MMP13P45452 AC020763.4-201ENST00000623414 4170 ntBASIC19.36■□□□□ 0.69
MMP13P45452 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 AC096733.2-201ENST00000609937 1394 ntBASIC19.36■□□□□ 0.69
MMP13P45452 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.36■□□□□ 0.69
MMP13P45452 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP13P45452 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.36■□□□□ 0.69
MMP13P45452 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MMP13P45452 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MMP13P45452 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP13P45452 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP13P45452 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MMP13P45452 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP13P45452 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.35■□□□□ 0.69
MMP13P45452 ANO7L1-203ENST00000602586 1720 ntBASIC19.35■□□□□ 0.69
MMP13P45452 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.35■□□□□ 0.69
MMP13P45452 MFAP1P1-201ENST00000442257 1255 ntBASIC19.35■□□□□ 0.69
MMP13P45452 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP13P45452 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.35■□□□□ 0.69
MMP13P45452 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
MMP13P45452 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
MMP13P45452 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MMP13P45452 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MMP13P45452 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.35■□□□□ 0.69
MMP13P45452 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MMP13P45452 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.34■□□□□ 0.69
MMP13P45452 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.34■□□□□ 0.69
MMP13P45452 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MMP13P45452 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms