Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.22■□□□□ 0.19
GDNFP39905 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GDNFP39905 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.21■□□□□ 0.19
GDNFP39905 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
GDNFP39905 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.21■□□□□ 0.19
GDNFP39905 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
GDNFP39905 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.21■□□□□ 0.19
GDNFP39905 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.21■□□□□ 0.19
GDNFP39905 UNC93B4-201ENST00000505679 747 ntBASIC16.21■□□□□ 0.19
GDNFP39905 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.21■□□□□ 0.19
GDNFP39905 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.21■□□□□ 0.19
GDNFP39905 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 AC008687.6-201ENST00000596318 630 ntBASIC16.21■□□□□ 0.19
GDNFP39905 AC008403.3-201ENST00000598924 454 ntBASIC16.21■□□□□ 0.19
GDNFP39905 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.21■□□□□ 0.19
GDNFP39905 AC120498.8-201ENST00000614275 531 ntBASIC16.21■□□□□ 0.19
GDNFP39905 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
GDNFP39905 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.21■□□□□ 0.19
GDNFP39905 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
GDNFP39905 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDNFP39905 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
GDNFP39905 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDNFP39905 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
GDNFP39905 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
GDNFP39905 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.2■□□□□ 0.18
GDNFP39905 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
GDNFP39905 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GDNFP39905 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.2■□□□□ 0.18
GDNFP39905 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
GDNFP39905 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.2■□□□□ 0.18
GDNFP39905 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.2■□□□□ 0.18
GDNFP39905 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
GDNFP39905 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.2■□□□□ 0.18
GDNFP39905 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.2■□□□□ 0.18
GDNFP39905 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.2■□□□□ 0.18
GDNFP39905 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
GDNFP39905 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.2■□□□□ 0.18
GDNFP39905 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
GDNFP39905 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.2■□□□□ 0.18
GDNFP39905 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.2■□□□□ 0.18
GDNFP39905 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
GDNFP39905 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
GDNFP39905 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
GDNFP39905 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
GDNFP39905 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
GDNFP39905 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
GDNFP39905 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms