Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.67■□□□□ 0.42
RORAP35398 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RORAP35398 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 AC069148.1-201ENST00000608741 768 ntBASIC17.67■□□□□ 0.42
RORAP35398 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.67■□□□□ 0.42
RORAP35398 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RORAP35398 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 AC120498.9-201ENST00000339021 3867 ntBASIC17.67■□□□□ 0.42
RORAP35398 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.67■□□□□ 0.42
RORAP35398 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RORAP35398 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.67■□□□□ 0.42
RORAP35398 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RORAP35398 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.66■□□□□ 0.42
RORAP35398 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.66■□□□□ 0.42
RORAP35398 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RORAP35398 KRT8P7-201ENST00000533003 1432 ntBASIC17.66■□□□□ 0.42
RORAP35398 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RORAP35398 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.66■□□□□ 0.42
RORAP35398 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RORAP35398 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.66■□□□□ 0.42
RORAP35398 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.66■□□□□ 0.42
RORAP35398 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.66■□□□□ 0.42
RORAP35398 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.66■□□□□ 0.42
RORAP35398 AC093458.2-201ENST00000623150 629 ntBASIC17.66■□□□□ 0.42
RORAP35398 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.66■□□□□ 0.42
RORAP35398 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RORAP35398 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
RORAP35398 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RORAP35398 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RORAP35398 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.66■□□□□ 0.42
RORAP35398 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RORAP35398 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RORAP35398 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RORAP35398 HOXB1-202ENST00000577092 1414 ntBASIC17.65■□□□□ 0.42
RORAP35398 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.65■□□□□ 0.42
RORAP35398 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RORAP35398 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.65■□□□□ 0.42
RORAP35398 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RORAP35398 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.65■□□□□ 0.42
RORAP35398 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 MIR564-202ENST00000385049 94 ntBASIC17.65■□□□□ 0.42
RORAP35398 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 AL645929.1-201ENST00000420084 975 ntBASIC17.65■□□□□ 0.42
RORAP35398 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.65■□□□□ 0.42
RORAP35398 MIR3917-201ENST00000580971 93 ntBASIC17.65■□□□□ 0.42
RORAP35398 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.65■□□□□ 0.42
RORAP35398 AL157888.1-201ENST00000631930 593 ntBASIC17.65■□□□□ 0.42
RORAP35398 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.65■□□□□ 0.42
RORAP35398 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RORAP35398 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RORAP35398 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
RORAP35398 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RORAP35398 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.65■□□□□ 0.42
RORAP35398 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RORAP35398 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
RORAP35398 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.42
RORAP35398 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RORAP35398 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.64■□□□□ 0.42
RORAP35398 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RORAP35398 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RORAP35398 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RORAP35398 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RORAP35398 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms