Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 AC124016.1-201ENST00000609552 612 ntBASIC17.32■□□□□ 0.36
TNFRSF1BP20333 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 AL162741.1-201ENST00000565563 1558 ntBASIC17.32■□□□□ 0.36
TNFRSF1BP20333 AC008764.6-201ENST00000595909 2069 ntBASIC17.32■□□□□ 0.36
TNFRSF1BP20333 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNFRSF1BP20333 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 AL445675.2-201ENST00000620291 557 ntBASIC17.31■□□□□ 0.36
TNFRSF1BP20333 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNFRSF1BP20333 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 AC091390.4-202ENST00000476426 537 ntBASIC17.3■□□□□ 0.36
TNFRSF1BP20333 RPS2P4-201ENST00000476944 856 ntBASIC17.3■□□□□ 0.36
TNFRSF1BP20333 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 AC131212.4-201ENST00000623606 975 ntBASIC17.3■□□□□ 0.36
TNFRSF1BP20333 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNFRSF1BP20333 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 ESRRAP1-201ENST00000400596 1257 ntBASIC17.29■□□□□ 0.36
TNFRSF1BP20333 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 KRT8P3-201ENST00000519669 1449 ntBASIC17.29■□□□□ 0.36
TNFRSF1BP20333 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TNFRSF1BP20333 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms