Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRKCAP17252 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRKCAP17252 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRKCAP17252 AC079598.2-202ENST00000546624 1451 ntBASIC17.24■□□□□ 0.35
PRKCAP17252 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.24■□□□□ 0.35
PRKCAP17252 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.24■□□□□ 0.35
PRKCAP17252 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.24■□□□□ 0.35
PRKCAP17252 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.24■□□□□ 0.35
PRKCAP17252 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PRKCAP17252 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.24■□□□□ 0.35
PRKCAP17252 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.24■□□□□ 0.35
PRKCAP17252 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRKCAP17252 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
PRKCAP17252 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.23■□□□□ 0.35
PRKCAP17252 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.23■□□□□ 0.35
PRKCAP17252 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PRKCAP17252 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRKCAP17252 MFAP1P1-201ENST00000442257 1255 ntBASIC17.23■□□□□ 0.35
PRKCAP17252 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.23■□□□□ 0.35
PRKCAP17252 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRKCAP17252 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.23■□□□□ 0.35
PRKCAP17252 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PRKCAP17252 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.22■□□□□ 0.35
PRKCAP17252 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.22■□□□□ 0.35
PRKCAP17252 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PRKCAP17252 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 CRYGFP-201ENST00000418459 633 ntBASIC17.22■□□□□ 0.35
PRKCAP17252 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.22■□□□□ 0.35
PRKCAP17252 AP005242.2-201ENST00000580065 1175 ntBASIC17.22■□□□□ 0.35
PRKCAP17252 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 AP000525.1-201ENST00000608286 694 ntBASIC17.22■□□□□ 0.35
PRKCAP17252 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRKCAP17252 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.22■□□□□ 0.35
PRKCAP17252 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.22■□□□□ 0.35
PRKCAP17252 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRKCAP17252 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.21■□□□□ 0.35
PRKCAP17252 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRKCAP17252 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PRKCAP17252 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRKCAP17252 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.21■□□□□ 0.35
PRKCAP17252 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRKCAP17252 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms