Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SRPRAP08240 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRPRAP08240 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SRPRAP08240 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SRPRAP08240 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.78■□□□□ 0.6
SRPRAP08240 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.78■□□□□ 0.6
SRPRAP08240 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SRPRAP08240 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.78■□□□□ 0.6
SRPRAP08240 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.78■□□□□ 0.6
SRPRAP08240 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
SRPRAP08240 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.78■□□□□ 0.6
SRPRAP08240 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.78■□□□□ 0.6
SRPRAP08240 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.78■□□□□ 0.6
SRPRAP08240 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.78■□□□□ 0.6
SRPRAP08240 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRPRAP08240 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRPRAP08240 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRPRAP08240 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.77■□□□□ 0.6
SRPRAP08240 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SRPRAP08240 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.77■□□□□ 0.6
SRPRAP08240 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.77■□□□□ 0.6
SRPRAP08240 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
SRPRAP08240 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 ATP5G2P1-201ENST00000433580 426 ntBASIC18.77■□□□□ 0.6
SRPRAP08240 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
SRPRAP08240 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.77■□□□□ 0.6
SRPRAP08240 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.77■□□□□ 0.6
SRPRAP08240 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.77■□□□□ 0.6
SRPRAP08240 AL121672.3-201ENST00000608644 468 ntBASIC18.77■□□□□ 0.6
SRPRAP08240 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.77■□□□□ 0.6
SRPRAP08240 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.77■□□□□ 0.6
SRPRAP08240 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.77■□□□□ 0.6
SRPRAP08240 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SRPRAP08240 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.77■□□□□ 0.59
SRPRAP08240 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.77■□□□□ 0.59
SRPRAP08240 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.77■□□□□ 0.59
SRPRAP08240 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SRPRAP08240 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SRPRAP08240 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SRPRAP08240 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.76■□□□□ 0.59
SRPRAP08240 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SRPRAP08240 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.76■□□□□ 0.59
SRPRAP08240 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.76■□□□□ 0.59
SRPRAP08240 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SRPRAP08240 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.76■□□□□ 0.59
SRPRAP08240 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.76■□□□□ 0.59
SRPRAP08240 BX276092.5-203ENST00000456199 560 ntBASIC18.76■□□□□ 0.59
SRPRAP08240 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.76■□□□□ 0.59
SRPRAP08240 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.76■□□□□ 0.59
SRPRAP08240 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.76■□□□□ 0.59
SRPRAP08240 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SRPRAP08240 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SRPRAP08240 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRPRAP08240 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SRPRAP08240 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRPRAP08240 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SRPRAP08240 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms