Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.63■□□□□ 0.41
CTSBP07858 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.63■□□□□ 0.41
CTSBP07858 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSBP07858 AC091076.1-201ENST00000610741 619 ntBASIC17.63■□□□□ 0.41
CTSBP07858 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSBP07858 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.63■□□□□ 0.41
CTSBP07858 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CTSBP07858 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 AC087289.5-201ENST00000586076 3175 ntBASIC17.63■□□□□ 0.41
CTSBP07858 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CTSBP07858 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 KRT8P7-201ENST00000533003 1432 ntBASIC17.63■□□□□ 0.41
CTSBP07858 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTSBP07858 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSBP07858 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CTSBP07858 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CTSBP07858 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSBP07858 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CTSBP07858 HLA-F-220ENST00000434407 884 ntBASIC17.62■□□□□ 0.41
CTSBP07858 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSBP07858 AL136038.4-201ENST00000603606 1261 ntBASIC17.62■□□□□ 0.41
CTSBP07858 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSBP07858 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSBP07858 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSBP07858 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSBP07858 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSBP07858 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.62■□□□□ 0.41
CTSBP07858 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSBP07858 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CTSBP07858 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.62■□□□□ 0.41
CTSBP07858 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTSBP07858 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSBP07858 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSBP07858 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.61■□□□□ 0.41
CTSBP07858 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.61■□□□□ 0.41
CTSBP07858 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSBP07858 AC093458.2-201ENST00000623150 629 ntBASIC17.61■□□□□ 0.41
CTSBP07858 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSBP07858 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
CTSBP07858 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSBP07858 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSBP07858 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTSBP07858 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 AL645929.1-201ENST00000420084 975 ntBASIC17.6■□□□□ 0.41
CTSBP07858 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.6■□□□□ 0.41
CTSBP07858 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.6■□□□□ 0.41
CTSBP07858 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.6■□□□□ 0.41
CTSBP07858 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSBP07858 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSBP07858 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSBP07858 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSBP07858 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTSBP07858 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CTSBP07858 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSBP07858 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSBP07858 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSBP07858 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSBP07858 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.59■□□□□ 0.41
CTSBP07858 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 CROCCP3-202ENST00000420820 1947 ntBASIC17.59■□□□□ 0.41
CTSBP07858 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CTSBP07858 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSBP07858 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSBP07858 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms