Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.66■□□□□ 0.74
RB1P06400 AC114341.1-201ENST00000618070 349 ntBASIC19.66■□□□□ 0.74
RB1P06400 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RB1P06400 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RB1P06400 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
RB1P06400 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 LINC01521-201ENST00000504184 1943 ntBASIC19.65■□□□□ 0.74
RB1P06400 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.65■□□□□ 0.74
RB1P06400 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.65■□□□□ 0.74
RB1P06400 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
RB1P06400 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
RB1P06400 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.65■□□□□ 0.74
RB1P06400 AC008608.2-201ENST00000606089 416 ntBASIC19.65■□□□□ 0.74
RB1P06400 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RB1P06400 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.65■□□□□ 0.74
RB1P06400 PMS2P7-201ENST00000506558 1336 ntBASIC19.65■□□□□ 0.74
RB1P06400 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.65■□□□□ 0.74
RB1P06400 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RB1P06400 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.65■□□□□ 0.74
RB1P06400 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RB1P06400 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.64■□□□□ 0.74
RB1P06400 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RB1P06400 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RB1P06400 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
RB1P06400 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RB1P06400 AC132008.2-207ENST00000454517 770 ntBASIC19.64■□□□□ 0.73
RB1P06400 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.64■□□□□ 0.73
RB1P06400 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.64■□□□□ 0.73
RB1P06400 AC092865.5-201ENST00000545435 363 ntBASIC19.64■□□□□ 0.73
RB1P06400 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.64■□□□□ 0.73
RB1P06400 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RB1P06400 AC148477.8-201ENST00000624298 468 ntBASIC19.64■□□□□ 0.73
RB1P06400 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RB1P06400 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RB1P06400 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
RB1P06400 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RB1P06400 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 AC092667.1-201ENST00000434301 2586 ntBASIC19.63■□□□□ 0.73
RB1P06400 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RB1P06400 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.63■□□□□ 0.73
RB1P06400 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.63■□□□□ 0.73
RB1P06400 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 MIR1233-2-201ENST00000408138 82 ntBASIC19.63■□□□□ 0.73
RB1P06400 MIR1233-1-201ENST00000408722 82 ntBASIC19.63■□□□□ 0.73
RB1P06400 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.63■□□□□ 0.73
RB1P06400 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.63■□□□□ 0.73
RB1P06400 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.63■□□□□ 0.73
RB1P06400 AC018712.1-201ENST00000455767 687 ntBASIC19.63■□□□□ 0.73
RB1P06400 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.63■□□□□ 0.73
RB1P06400 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.63■□□□□ 0.73
RB1P06400 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.63■□□□□ 0.73
RB1P06400 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.63■□□□□ 0.73
RB1P06400 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.63■□□□□ 0.73
RB1P06400 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.63■□□□□ 0.73
RB1P06400 AC068587.9-201ENST00000641814 219 ntBASIC19.63■□□□□ 0.73
RB1P06400 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.63■□□□□ 0.73
RB1P06400 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RB1P06400 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.63■□□□□ 0.73
RB1P06400 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.62■□□□□ 0.73
RB1P06400 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.62■□□□□ 0.73
RB1P06400 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RB1P06400 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
RB1P06400 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RB1P06400 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RB1P06400 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RB1P06400 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.62■□□□□ 0.73
RB1P06400 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RB1P06400 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.62■□□□□ 0.73
RB1P06400 AC096582.2-201ENST00000510860 516 ntBASIC19.62■□□□□ 0.73
RB1P06400 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.62■□□□□ 0.73
RB1P06400 AC139887.3-201ENST00000568585 713 ntBASIC19.62■□□□□ 0.73
RB1P06400 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.62■□□□□ 0.73
RB1P06400 TERC-201ENST00000602385 541 ntBASIC19.62■□□□□ 0.73
RB1P06400 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms