Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CHGBP05060 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 AL031133.1-201ENST00000406807 723 ntBASIC22.36■■□□□ 1.17
CHGBP05060 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.36■■□□□ 1.17
CHGBP05060 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.36■■□□□ 1.17
CHGBP05060 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CHGBP05060 AC104390.1-201ENST00000555663 520 ntBASIC22.36■■□□□ 1.17
CHGBP05060 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CHGBP05060 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHGBP05060 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
CHGBP05060 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.36■■□□□ 1.17
CHGBP05060 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.35■■□□□ 1.17
CHGBP05060 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 RASA4DP-201ENST00000460726 1199 ntBASIC22.35■■□□□ 1.17
CHGBP05060 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.35■■□□□ 1.17
CHGBP05060 AC083849.1-201ENST00000615227 514 ntBASIC22.35■■□□□ 1.17
CHGBP05060 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.35■■□□□ 1.17
CHGBP05060 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.35■■□□□ 1.17
CHGBP05060 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHGBP05060 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.35■■□□□ 1.17
CHGBP05060 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
CHGBP05060 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CHGBP05060 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.35■■□□□ 1.17
CHGBP05060 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.35■■□□□ 1.17
CHGBP05060 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.34■■□□□ 1.17
CHGBP05060 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.34■■□□□ 1.17
CHGBP05060 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
CHGBP05060 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
CHGBP05060 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.34■■□□□ 1.17
CHGBP05060 AC112907.2-201ENST00000448639 330 ntBASIC22.34■■□□□ 1.17
CHGBP05060 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.34■■□□□ 1.17
CHGBP05060 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.34■■□□□ 1.17
CHGBP05060 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.34■■□□□ 1.17
CHGBP05060 AC010240.3-201ENST00000607688 395 ntBASIC22.34■■□□□ 1.17
CHGBP05060 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CHGBP05060 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
CHGBP05060 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHGBP05060 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.33■■□□□ 1.17
CHGBP05060 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.33■■□□□ 1.17
CHGBP05060 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.33■■□□□ 1.17
CHGBP05060 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.33■■□□□ 1.17
CHGBP05060 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.33■■□□□ 1.17
CHGBP05060 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.33■■□□□ 1.17
CHGBP05060 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.33■■□□□ 1.17
CHGBP05060 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHGBP05060 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CHGBP05060 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHGBP05060 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHGBP05060 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.33■■□□□ 1.16
CHGBP05060 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC22.33■■□□□ 1.16
CHGBP05060 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.33■■□□□ 1.16
CHGBP05060 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHGBP05060 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.32■■□□□ 1.16
CHGBP05060 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.32■■□□□ 1.16
CHGBP05060 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CHGBP05060 STARP1-201ENST00000397973 869 ntBASIC22.32■■□□□ 1.16
CHGBP05060 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.32■■□□□ 1.16
CHGBP05060 KRT18P41-201ENST00000518924 1277 ntBASIC22.32■■□□□ 1.16
CHGBP05060 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms