Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ATP1A1P05023 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP1A1P05023 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP1A1P05023 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATP1A1P05023 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP1A1P05023 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ATP1A1P05023 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP1A1P05023 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP1A1P05023 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ATP1A1P05023 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP1A1P05023 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.81■□□□□ 0.76
ATP1A1P05023 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP1A1P05023 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ATP1A1P05023 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP1A1P05023 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 KRT17P3-201ENST00000420566 1262 ntBASIC19.81■□□□□ 0.76
ATP1A1P05023 POM121L13P-201ENST00000422362 380 ntBASIC19.81■□□□□ 0.76
ATP1A1P05023 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP1A1P05023 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP1A1P05023 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP1A1P05023 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ATP1A1P05023 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP1A1P05023 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ATP1A1P05023 AC138028.4-201ENST00000564984 1845 ntBASIC19.81■□□□□ 0.76
ATP1A1P05023 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP1A1P05023 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ATP1A1P05023 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP1A1P05023 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP1A1P05023 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATP1A1P05023 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ATP1A1P05023 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP1A1P05023 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP1A1P05023 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ATP1A1P05023 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
ATP1A1P05023 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
ATP1A1P05023 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP1A1P05023 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP1A1P05023 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1A1P05023 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1A1P05023 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.79■□□□□ 0.76
ATP1A1P05023 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1A1P05023 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1A1P05023 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1A1P05023 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ATP1A1P05023 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.79■□□□□ 0.76
ATP1A1P05023 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ATP1A1P05023 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
ATP1A1P05023 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ATP1A1P05023 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.79■□□□□ 0.76
ATP1A1P05023 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms