Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HLA-DPB1P04440 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 AC128676.1-201ENST00000454392 318 ntBASIC16.75■□□□□ 0.27
HLA-DPB1P04440 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 PRKY-204ENST00000533551 1019 ntBASIC16.75■□□□□ 0.27
HLA-DPB1P04440 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPB1P04440 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 MTDHP1-201ENST00000605323 784 ntBASIC16.74■□□□□ 0.27
HLA-DPB1P04440 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 AL023875.1-201ENST00000640777 796 ntBASIC16.74■□□□□ 0.27
HLA-DPB1P04440 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HLA-DPB1P04440 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.73■□□□□ 0.27
HLA-DPB1P04440 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 GNAS-203ENST00000306120 1878 ntBASIC16.73■□□□□ 0.27
HLA-DPB1P04440 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HLA-DPB1P04440 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DPB1P04440 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DPB1P04440 PRORSD1P-202ENST00000563365 2154 ntBASIC16.72■□□□□ 0.27
HLA-DPB1P04440 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HLA-DPB1P04440 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms