Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CTNND1O60716 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CTNND1O60716 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 IGHV3-47-201ENST00000425060 335 ntBASIC21.72■■□□□ 1.07
CTNND1O60716 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.72■■□□□ 1.07
CTNND1O60716 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.72■■□□□ 1.07
CTNND1O60716 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.72■■□□□ 1.07
CTNND1O60716 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CTNND1O60716 AC138894.3-201ENST00000603787 634 ntBASIC21.72■■□□□ 1.07
CTNND1O60716 AL592071.1-201ENST00000611956 408 ntBASIC21.72■■□□□ 1.07
CTNND1O60716 AC124864.1-201ENST00000623408 392 ntBASIC21.72■■□□□ 1.07
CTNND1O60716 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CTNND1O60716 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.72■■□□□ 1.07
CTNND1O60716 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTNND1O60716 Z98044.1-201ENST00000632503 1764 ntBASIC21.71■■□□□ 1.07
CTNND1O60716 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.71■■□□□ 1.07
CTNND1O60716 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.71■■□□□ 1.07
CTNND1O60716 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.71■■□□□ 1.07
CTNND1O60716 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 AP000347.1-202ENST00000435868 847 ntBASIC21.71■■□□□ 1.07
CTNND1O60716 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.71■■□□□ 1.07
CTNND1O60716 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.71■■□□□ 1.07
CTNND1O60716 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
CTNND1O60716 AC099336.1-202ENST00000602961 463 ntBASIC21.71■■□□□ 1.07
CTNND1O60716 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.71■■□□□ 1.07
CTNND1O60716 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.71■■□□□ 1.07
CTNND1O60716 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.71■■□□□ 1.07
CTNND1O60716 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CTNND1O60716 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTNND1O60716 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.7■■□□□ 1.07
CTNND1O60716 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.7■■□□□ 1.06
CTNND1O60716 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.7■■□□□ 1.06
CTNND1O60716 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.7■■□□□ 1.06
CTNND1O60716 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.7■■□□□ 1.06
CTNND1O60716 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.7■■□□□ 1.06
CTNND1O60716 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CTNND1O60716 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.7■■□□□ 1.06
CTNND1O60716 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.7■■□□□ 1.06
CTNND1O60716 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.7■■□□□ 1.06
CTNND1O60716 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CTNND1O60716 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.7■■□□□ 1.06
CTNND1O60716 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CTNND1O60716 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTNND1O60716 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNND1O60716 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CTNND1O60716 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.69■■□□□ 1.06
CTNND1O60716 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.69■■□□□ 1.06
CTNND1O60716 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CTNND1O60716 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNND1O60716 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.69■■□□□ 1.06
CTNND1O60716 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.69■■□□□ 1.06
CTNND1O60716 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNND1O60716 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.69■■□□□ 1.06
CTNND1O60716 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.69■■□□□ 1.06
CTNND1O60716 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CTNND1O60716 AC106795.1-205ENST00000512851 1056 ntBASIC21.69■■□□□ 1.06
CTNND1O60716 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTNND1O60716 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.69■■□□□ 1.06
CTNND1O60716 AL353801.3-201ENST00000609898 542 ntBASIC21.69■■□□□ 1.06
CTNND1O60716 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.69■■□□□ 1.06
CTNND1O60716 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CTNND1O60716 AL353692.3-201ENST00000407031 1396 ntBASIC21.69■■□□□ 1.06
CTNND1O60716 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTNND1O60716 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms