Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.75■□□□□ 0.27
ZIC3O60481 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.75■□□□□ 0.27
ZIC3O60481 AC087388.1-201ENST00000571370 1112 ntBASIC16.75■□□□□ 0.27
ZIC3O60481 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
ZIC3O60481 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 AC112777.1-201ENST00000540175 1423 ntBASIC16.75■□□□□ 0.27
ZIC3O60481 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 ANO7L1-203ENST00000602586 1720 ntBASIC16.75■□□□□ 0.27
ZIC3O60481 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ZIC3O60481 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.75■□□□□ 0.27
ZIC3O60481 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZIC3O60481 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ZIC3O60481 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZIC3O60481 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ZIC3O60481 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZIC3O60481 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.74■□□□□ 0.27
ZIC3O60481 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.74■□□□□ 0.27
ZIC3O60481 AC079602.3-201ENST00000623931 403 ntBASIC16.74■□□□□ 0.27
ZIC3O60481 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.74■□□□□ 0.27
ZIC3O60481 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.74■□□□□ 0.27
ZIC3O60481 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZIC3O60481 AL163051.1-201ENST00000569214 1512 ntBASIC16.74■□□□□ 0.27
ZIC3O60481 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ZIC3O60481 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.73■□□□□ 0.27
ZIC3O60481 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
ZIC3O60481 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ZIC3O60481 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.73■□□□□ 0.27
ZIC3O60481 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.73■□□□□ 0.27
ZIC3O60481 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.73■□□□□ 0.27
ZIC3O60481 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZIC3O60481 MYLKP1-201ENST00000509077 1580 ntBASIC16.72■□□□□ 0.27
ZIC3O60481 AC120498.9-201ENST00000339021 3867 ntBASIC16.72■□□□□ 0.27
ZIC3O60481 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ZIC3O60481 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.72■□□□□ 0.27
ZIC3O60481 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ZIC3O60481 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ZIC3O60481 HBZP1-201ENST00000354915 429 ntBASIC16.72■□□□□ 0.27
ZIC3O60481 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.72■□□□□ 0.27
ZIC3O60481 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.72■□□□□ 0.27
ZIC3O60481 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.72■□□□□ 0.27
ZIC3O60481 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.72■□□□□ 0.27
ZIC3O60481 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
ZIC3O60481 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.72■□□□□ 0.27
ZIC3O60481 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ZIC3O60481 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.72■□□□□ 0.27
ZIC3O60481 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZIC3O60481 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.72■□□□□ 0.27
ZIC3O60481 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.71■□□□□ 0.27
ZIC3O60481 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 LINC01311-201ENST00000565162 1445 ntBASIC16.71■□□□□ 0.27
ZIC3O60481 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ZIC3O60481 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.71■□□□□ 0.27
ZIC3O60481 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.71■□□□□ 0.27
ZIC3O60481 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZIC3O60481 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.71■□□□□ 0.27
ZIC3O60481 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.71■□□□□ 0.27
ZIC3O60481 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms