Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.56■□□□□ 0.4
URB1O60287 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
URB1O60287 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.56■□□□□ 0.4
URB1O60287 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.56■□□□□ 0.4
URB1O60287 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.56■□□□□ 0.4
URB1O60287 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.56■□□□□ 0.4
URB1O60287 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.56■□□□□ 0.4
URB1O60287 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
URB1O60287 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.56■□□□□ 0.4
URB1O60287 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.56■□□□□ 0.4
URB1O60287 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
URB1O60287 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
URB1O60287 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
URB1O60287 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
URB1O60287 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.55■□□□□ 0.4
URB1O60287 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.55■□□□□ 0.4
URB1O60287 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
URB1O60287 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.55■□□□□ 0.4
URB1O60287 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.55■□□□□ 0.4
URB1O60287 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.55■□□□□ 0.4
URB1O60287 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.55■□□□□ 0.4
URB1O60287 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.55■□□□□ 0.4
URB1O60287 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
URB1O60287 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.55■□□□□ 0.4
URB1O60287 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.55■□□□□ 0.4
URB1O60287 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.55■□□□□ 0.4
URB1O60287 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.55■□□□□ 0.4
URB1O60287 AC005332.3-201ENST00000589904 676 ntBASIC17.55■□□□□ 0.4
URB1O60287 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.55■□□□□ 0.4
URB1O60287 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
URB1O60287 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
URB1O60287 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
URB1O60287 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
URB1O60287 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.54■□□□□ 0.4
URB1O60287 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
URB1O60287 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
URB1O60287 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.54■□□□□ 0.4
URB1O60287 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
URB1O60287 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.54■□□□□ 0.4
URB1O60287 AP005901.3-202ENST00000581653 237 ntBASIC17.54■□□□□ 0.4
URB1O60287 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.54■□□□□ 0.4
URB1O60287 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.54■□□□□ 0.4
URB1O60287 AL390719.2-201ENST00000606993 987 ntBASIC17.54■□□□□ 0.4
URB1O60287 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
URB1O60287 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
URB1O60287 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
URB1O60287 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.54■□□□□ 0.4
URB1O60287 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 LINC01006-201ENST00000333319 2292 ntBASIC17.54■□□□□ 0.4
URB1O60287 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
URB1O60287 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.53■□□□□ 0.4
URB1O60287 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.53■□□□□ 0.4
URB1O60287 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
URB1O60287 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
URB1O60287 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
URB1O60287 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms