Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL13O43927 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.66■□□□□ 0.26
CXCL13O43927 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 AL359075.1-203ENST00000462729 1002 ntBASIC16.66■□□□□ 0.26
CXCL13O43927 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL13O43927 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL13O43927 NTF6B-201ENST00000591913 560 ntBASIC16.66■□□□□ 0.26
CXCL13O43927 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.66■□□□□ 0.26
CXCL13O43927 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.66■□□□□ 0.26
CXCL13O43927 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CXCL13O43927 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CXCL13O43927 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CXCL13O43927 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CXCL13O43927 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CXCL13O43927 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.65■□□□□ 0.26
CXCL13O43927 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 AC018445.3-201ENST00000624177 1945 ntBASIC16.65■□□□□ 0.26
CXCL13O43927 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 KRT8P7-201ENST00000533003 1432 ntBASIC16.65■□□□□ 0.26
CXCL13O43927 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 HOXB1-202ENST00000577092 1414 ntBASIC16.65■□□□□ 0.26
CXCL13O43927 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CXCL13O43927 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.65■□□□□ 0.26
CXCL13O43927 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.65■□□□□ 0.26
CXCL13O43927 HOMER2P1-201ENST00000455653 964 ntBASIC16.65■□□□□ 0.26
CXCL13O43927 SEC1P-202ENST00000473944 940 ntBASIC16.65■□□□□ 0.26
CXCL13O43927 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.65■□□□□ 0.26
CXCL13O43927 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CXCL13O43927 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.65■□□□□ 0.26
CXCL13O43927 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.65■□□□□ 0.26
CXCL13O43927 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CXCL13O43927 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CXCL13O43927 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CXCL13O43927 AC087289.5-201ENST00000586076 3175 ntBASIC16.65■□□□□ 0.26
CXCL13O43927 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CXCL13O43927 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.64■□□□□ 0.26
CXCL13O43927 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CXCL13O43927 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CXCL13O43927 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.64■□□□□ 0.25
CXCL13O43927 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CXCL13O43927 FAM8A6P-201ENST00000407496 1135 ntBASIC16.64■□□□□ 0.25
CXCL13O43927 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.64■□□□□ 0.25
CXCL13O43927 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms