Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
IDH3BO43837 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.1■□□□□ 0.33
IDH3BO43837 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
IDH3BO43837 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IDH3BO43837 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.1■□□□□ 0.33
IDH3BO43837 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
IDH3BO43837 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
IDH3BO43837 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.09■□□□□ 0.33
IDH3BO43837 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3BO43837 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IDH3BO43837 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.09■□□□□ 0.33
IDH3BO43837 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.09■□□□□ 0.33
IDH3BO43837 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.09■□□□□ 0.33
IDH3BO43837 HLA-A-209ENST00000638375 975 ntBASIC17.09■□□□□ 0.33
IDH3BO43837 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3BO43837 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.09■□□□□ 0.33
IDH3BO43837 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.09■□□□□ 0.33
IDH3BO43837 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.09■□□□□ 0.33
IDH3BO43837 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 AC090164.3-201ENST00000610780 2143 ntBASIC17.09■□□□□ 0.33
IDH3BO43837 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 WIZP1-201ENST00000531444 2299 ntBASIC17.09■□□□□ 0.33
IDH3BO43837 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IDH3BO43837 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IDH3BO43837 MST1L-201ENST00000442552 2185 ntBASIC17.08■□□□□ 0.33
IDH3BO43837 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
IDH3BO43837 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.08■□□□□ 0.33
IDH3BO43837 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
IDH3BO43837 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.08■□□□□ 0.32
IDH3BO43837 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.08■□□□□ 0.32
IDH3BO43837 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.08■□□□□ 0.32
IDH3BO43837 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.08■□□□□ 0.32
IDH3BO43837 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.08■□□□□ 0.32
IDH3BO43837 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.08■□□□□ 0.32
IDH3BO43837 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.08■□□□□ 0.32
IDH3BO43837 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.08■□□□□ 0.32
IDH3BO43837 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.08■□□□□ 0.32
IDH3BO43837 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IDH3BO43837 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.07■□□□□ 0.32
IDH3BO43837 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
IDH3BO43837 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.07■□□□□ 0.32
IDH3BO43837 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.07■□□□□ 0.32
IDH3BO43837 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.07■□□□□ 0.32
IDH3BO43837 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IDH3BO43837 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
IDH3BO43837 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms