Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 IGHGP-201ENST00000390555 1178 ntBASIC23.86■■□□□ 1.41
KCNQ3O43525 AP000867.3-201ENST00000524675 377 ntBASIC23.86■■□□□ 1.41
KCNQ3O43525 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.86■■□□□ 1.41
KCNQ3O43525 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC23.86■■□□□ 1.41
KCNQ3O43525 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.86■■□□□ 1.41
KCNQ3O43525 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KCNQ3O43525 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KCNQ3O43525 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.86■■□□□ 1.41
KCNQ3O43525 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNQ3O43525 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNQ3O43525 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
KCNQ3O43525 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.85■■□□□ 1.41
KCNQ3O43525 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
KCNQ3O43525 AL845331.1-201ENST00000424978 1190 ntBASIC23.85■■□□□ 1.41
KCNQ3O43525 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC23.85■■□□□ 1.41
KCNQ3O43525 AC091607.1-201ENST00000490318 1060 ntBASIC23.85■■□□□ 1.41
KCNQ3O43525 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23.85■■□□□ 1.41
KCNQ3O43525 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.85■■□□□ 1.41
KCNQ3O43525 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.85■■□□□ 1.41
KCNQ3O43525 AC083906.6-201ENST00000641366 219 ntBASIC23.85■■□□□ 1.41
KCNQ3O43525 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
KCNQ3O43525 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KCNQ3O43525 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.84■■□□□ 1.41
KCNQ3O43525 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
KCNQ3O43525 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 AL499627.1-201ENST00000569373 2188 ntBASIC23.84■■□□□ 1.41
KCNQ3O43525 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.84■■□□□ 1.41
KCNQ3O43525 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.84■■□□□ 1.41
KCNQ3O43525 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 KRT18P41-201ENST00000518924 1277 ntBASIC23.84■■□□□ 1.41
KCNQ3O43525 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.84■■□□□ 1.41
KCNQ3O43525 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.84■■□□□ 1.41
KCNQ3O43525 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.84■■□□□ 1.41
KCNQ3O43525 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.84■■□□□ 1.41
KCNQ3O43525 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 AC024563.2-201ENST00000603282 481 ntBASIC23.84■■□□□ 1.41
KCNQ3O43525 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KCNQ3O43525 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.84■■□□□ 1.41
KCNQ3O43525 AL163051.1-201ENST00000569214 1512 ntBASIC23.84■■□□□ 1.41
KCNQ3O43525 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.83■■□□□ 1.41
KCNQ3O43525 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.83■■□□□ 1.41
KCNQ3O43525 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.41
KCNQ3O43525 BAALC-202ENST00000306391 243 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNQ3O43525 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 BAALC-204ENST00000330955 222 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNQ3O43525 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNQ3O43525 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.83■■□□□ 1.41
KCNQ3O43525 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.83■■□□□ 1.41
KCNQ3O43525 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.83■■□□□ 1.41
KCNQ3O43525 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC23.83■■□□□ 1.41
KCNQ3O43525 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNQ3O43525 GPR32P1-201ENST00000601788 811 ntBASIC23.83■■□□□ 1.41
KCNQ3O43525 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.83■■□□□ 1.41
KCNQ3O43525 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.83■■□□□ 1.41
KCNQ3O43525 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KCNQ3O43525 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
KCNQ3O43525 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNQ3O43525 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KCNQ3O43525 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNQ3O43525 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNQ3O43525 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.82■■□□□ 1.4
KCNQ3O43525 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
KCNQ3O43525 NUS1P1-201ENST00000446295 882 ntBASIC23.82■■□□□ 1.4
KCNQ3O43525 RN7SL606P-201ENST00000472779 293 ntBASIC23.82■■□□□ 1.4
KCNQ3O43525 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC23.82■■□□□ 1.4
KCNQ3O43525 AL691432.3-201ENST00000621860 400 ntBASIC23.82■■□□□ 1.4
KCNQ3O43525 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KCNQ3O43525 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KCNQ3O43525 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.82■■□□□ 1.4
KCNQ3O43525 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KCNQ3O43525 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
KCNQ3O43525 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC23.81■■□□□ 1.4
KCNQ3O43525 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms