Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2A1O14983 Z98044.1-201ENST00000632503 1764 ntBASIC21.31■■□□□ 1
ATP2A1O14983 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.3■■□□□ 1
ATP2A1O14983 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
ATP2A1O14983 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.3■■□□□ 1
ATP2A1O14983 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ATP2A1O14983 Z83836.1-201ENST00000624605 1642 ntBASIC21.3■■□□□ 1
ATP2A1O14983 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ATP2A1O14983 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.3■■□□□ 1
ATP2A1O14983 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.3■■□□□ 1
ATP2A1O14983 AC026396.1-201ENST00000419388 421 ntBASIC21.3■■□□□ 1
ATP2A1O14983 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.3■■□□□ 1
ATP2A1O14983 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 PRELID1P1-202ENST00000567272 903 ntBASIC21.3■■□□□ 1
ATP2A1O14983 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP2A1O14983 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.3■■□□□ 1
ATP2A1O14983 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.3■■□□□ 1
ATP2A1O14983 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.3■■□□□ 1
ATP2A1O14983 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.3■■□□□ 1
ATP2A1O14983 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.3■■□□□ 1
ATP2A1O14983 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.3■■□□□ 1
ATP2A1O14983 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
ATP2A1O14983 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
ATP2A1O14983 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2A1O14983 KRT18P1-202ENST00000452408 1331 ntBASIC21.29■■□□□ 1
ATP2A1O14983 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ATP2A1O14983 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 AC093484.2-201ENST00000580996 2166 ntBASIC21.29■■□□□ 1
ATP2A1O14983 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.29■■□□□ 1
ATP2A1O14983 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ATP2A1O14983 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.29■■□□□ 1
ATP2A1O14983 AP003733.1-201ENST00000491725 852 ntBASIC21.29■■□□□ 1
ATP2A1O14983 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP2A1O14983 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.29■■□□□ 1
ATP2A1O14983 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.29■■□□□ 1
ATP2A1O14983 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.29■■□□□ 1
ATP2A1O14983 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.29■■□□□ 1
ATP2A1O14983 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ATP2A1O14983 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATP2A1O14983 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
ATP2A1O14983 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.29■■□□□ 1
ATP2A1O14983 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.29■■□□□ 1
ATP2A1O14983 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.29■■□□□ 1
ATP2A1O14983 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.28■■□□□ 1
ATP2A1O14983 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.28■■□□□ 1
ATP2A1O14983 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.28■■□□□ 1
ATP2A1O14983 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.28■■□□□ 1
ATP2A1O14983 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ATP2A1O14983 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.28■■□□□ 1
ATP2A1O14983 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.28■■□□□ 1
ATP2A1O14983 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.28■■□□□ 1
ATP2A1O14983 AC009065.1-201ENST00000564055 1225 ntBASIC21.28■■□□□ 1
ATP2A1O14983 AC090616.6-201ENST00000582640 721 ntBASIC21.28■■□□□ 1
ATP2A1O14983 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.28■■□□□ 1
ATP2A1O14983 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.28■■□□□ 1
ATP2A1O14983 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.28■■□□□ 1
ATP2A1O14983 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2A1O14983 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATP2A1O14983 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.27■■□□□ 1
ATP2A1O14983 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.27■■□□□ 1
ATP2A1O14983 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 AL357033.4-201ENST00000617703 1807 ntBASIC21.27■■□□□ 1
ATP2A1O14983 KRT89P-201ENST00000620027 1478 ntBASIC21.27■■□□□ 1
ATP2A1O14983 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
ATP2A1O14983 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.27■■□□□ 1
ATP2A1O14983 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP2A1O14983 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.27■■□□□ 1
ATP2A1O14983 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms