Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.91■□□□□ 0.46
CDX4O14627 GPX1P2-201ENST00000429271 606 ntBASIC17.91■□□□□ 0.46
CDX4O14627 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDX4O14627 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.91■□□□□ 0.46
CDX4O14627 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.91■□□□□ 0.46
CDX4O14627 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.91■□□□□ 0.46
CDX4O14627 AC034105.1-201ENST00000563488 319 ntBASIC17.91■□□□□ 0.46
CDX4O14627 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.91■□□□□ 0.46
CDX4O14627 AP001269.4-201ENST00000609611 512 ntBASIC17.91■□□□□ 0.46
CDX4O14627 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.91■□□□□ 0.46
CDX4O14627 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDX4O14627 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.91■□□□□ 0.46
CDX4O14627 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDX4O14627 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDX4O14627 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDX4O14627 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDX4O14627 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
CDX4O14627 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.91■□□□□ 0.46
CDX4O14627 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.91■□□□□ 0.46
CDX4O14627 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDX4O14627 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDX4O14627 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDX4O14627 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.9■□□□□ 0.46
CDX4O14627 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CDX4O14627 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.9■□□□□ 0.46
CDX4O14627 MED15P5-201ENST00000423150 992 ntBASIC17.9■□□□□ 0.46
CDX4O14627 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.9■□□□□ 0.46
CDX4O14627 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
CDX4O14627 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 AC005336.2-201ENST00000593183 939 ntBASIC17.9■□□□□ 0.46
CDX4O14627 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.9■□□□□ 0.46
CDX4O14627 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.9■□□□□ 0.46
CDX4O14627 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.9■□□□□ 0.46
CDX4O14627 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDX4O14627 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CDX4O14627 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDX4O14627 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CDX4O14627 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.89■□□□□ 0.45
CDX4O14627 RPS8P6-201ENST00000426177 609 ntBASIC17.89■□□□□ 0.45
CDX4O14627 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 AC112482.1-201ENST00000492080 688 ntBASIC17.89■□□□□ 0.45
CDX4O14627 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX4O14627 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX4O14627 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX4O14627 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX4O14627 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CDX4O14627 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.89■□□□□ 0.45
CDX4O14627 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX4O14627 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.89■□□□□ 0.45
CDX4O14627 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.89■□□□□ 0.45
CDX4O14627 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDX4O14627 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CDX4O14627 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX4O14627 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.88■□□□□ 0.45
CDX4O14627 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX4O14627 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX4O14627 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.88■□□□□ 0.45
CDX4O14627 AL591424.1-201ENST00000442569 1213 ntBASIC17.88■□□□□ 0.45
CDX4O14627 AC021087.4-201ENST00000563761 564 ntBASIC17.88■□□□□ 0.45
CDX4O14627 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 FEM1AP3-201ENST00000403722 1741 ntBASIC17.88■□□□□ 0.45
CDX4O14627 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX4O14627 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.88■□□□□ 0.45
CDX4O14627 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDX4O14627 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.88■□□□□ 0.45
CDX4O14627 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms